Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:46836077-48123851

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Timd4 11 46810800 to 46844332 33532 + protein coding gene T cell immunoglobulin and mucin domain containing 4
Gm12175 11 46874413 to 46874757 344 + pseudogene predicted gene 12175
A530047J11Rik 11 46971075 to 46971869 794 unclassified non-coding RNA gene RIKEN cDNA A530047J11 gene
Sgcd 11 46971077 to 47988851 1017774 - protein coding gene sarcoglycan, delta (dystrophin-associated glycoprotein)
Tssr3479 11 47097682 to 47097691 9 + TSS region transcription start site region 3479
Tssr107620 11 47105734 to 47105737 3 - TSS region transcription start site region 107620
Tssr107621 11 47240705 to 47240718 13 - TSS region transcription start site region 107621
Tssr3480 11 47282893 to 47282895 2 + TSS region transcription start site region 3480
Tssr107622 11 47379278 to 47379297 19 - TSS region transcription start site region 107622
Tssr107623 11 47379306 to 47379344 38 - TSS region transcription start site region 107623
Tssr107624 11 47379352 to 47379368 16 - TSS region transcription start site region 107624
Tssr107625 11 47379374 to 47379395 21 - TSS region transcription start site region 107625
Tssr107626 11 47379405 to 47379414 9 - TSS region transcription start site region 107626
Gm46256 11 47422101 to 47425504 3403 + pseudogene predicted gene, 46256
D11Mit239 11 47450141 to 47450429 288 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 239
Gm12176 11 47541432 to 47542306 874 + pseudogene predicted gene 12176
D11Mit190 11 47781479 to 47781625 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 190
D11Mit191 11 47889093 to 47889238 145 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 191
Gm23039 11 47912385 to 47912545 160 - snRNA gene predicted gene, 23039
Tssr101135 11 47933917 to 47933921 4 + TSS region transcription start site region 101135
Tssr107627 11 47985152 to 47985176 24 - TSS region transcription start site region 107627
Cpgi2777 11 47988061 to 47989567 1506 CpG island CpG island 2777
Tssr3481 11 47988426 to 47988437 11 - TSS region transcription start site region 3481
Tssr107628 11 47988962 to 47988980 18 - TSS region transcription start site region 107628
Tssr107629 11 47989386 to 47989409 23 - TSS region transcription start site region 107629
Cocia18 11 48117382 to 48117382 0 QTL cocaine-induced activity, QTL 18