Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:46750705-47730718

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Havcr1 11 46739822 to 46779578 39756 + protein coding gene hepatitis A virus cellular receptor 1
Tssr101127 11 46752406 to 46752414 8 + TSS region transcription start site region 101127
Gm39817 11 46798614 to 46804955 6341 - lncRNA gene predicted gene, 39817
Tssr101128 11 46810792 to 46810809 17 + TSS region transcription start site region 101128
Timd4 11 46810800 to 46844332 33532 + protein coding gene T cell immunoglobulin and mucin domain containing 4
Tssr101129 11 46815531 to 46815542 11 + TSS region transcription start site region 101129
Tssr101130 11 46815684 to 46815709 25 + TSS region transcription start site region 101130
Tssr101131 11 46815717 to 46815738 21 + TSS region transcription start site region 101131
Tssr101132 11 46817537 to 46817564 27 + TSS region transcription start site region 101132
Tssr101133 11 46817572 to 46817590 18 + TSS region transcription start site region 101133
Tssr101134 11 46821461 to 46821466 5 + TSS region transcription start site region 101134
Gm12175 11 46874413 to 46874757 344 + pseudogene predicted gene 12175
A530047J11Rik 11 46971075 to 46971869 794 unclassified non-coding RNA gene RIKEN cDNA A530047J11 gene
Sgcd 11 46971077 to 47988851 1017774 - protein coding gene sarcoglycan, delta (dystrophin-associated glycoprotein)
Tssr3479 11 47097682 to 47097691 9 + TSS region transcription start site region 3479
Tssr107620 11 47105734 to 47105737 3 - TSS region transcription start site region 107620
Tssr107621 11 47240705 to 47240718 13 - TSS region transcription start site region 107621
Tssr3480 11 47282893 to 47282895 2 + TSS region transcription start site region 3480
Tssr107622 11 47379278 to 47379297 19 - TSS region transcription start site region 107622
Tssr107623 11 47379306 to 47379344 38 - TSS region transcription start site region 107623
Tssr107624 11 47379352 to 47379368 16 - TSS region transcription start site region 107624
Tssr107625 11 47379374 to 47379395 21 - TSS region transcription start site region 107625
Tssr107626 11 47379405 to 47379414 9 - TSS region transcription start site region 107626
Gm46256 11 47422101 to 47425504 3403 + pseudogene predicted gene, 46256
D11Mit239 11 47450141 to 47450429 288 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 239
Gm12176 11 47541432 to 47542306 874 + pseudogene predicted gene 12176