Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:46462031-46662607

13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Havcr2	11	46454935 to 46481255	26320	+	protein coding gene	hepatitis A virus cellular receptor 2
Tssr101117	11	46479983 to 46479995	12	+	TSS region	transcription start site region 101117
Tssr101118	11	46480298 to 46480322	24	+	TSS region	transcription start site region 101118
Gm12169	11	46524251 to 46538156	13905	+	protein coding gene	predicted gene 12169
Acigg5	11	46528416 to 62992617	16464201		QTL	anti COL7 IgG2a/c antibody 5
Gm12170	11	46539782 to 46540081	299	-	pseudogene	predicted gene 12170
Gm12171	11	46548413 to 46556068	7655	+	lincRNA gene	predicted gene 12171
Tssr101119	11	46562004 to 46562006	2	+	TSS region	transcription start site region 101119
Rpl9-ps2	11	46562031 to 46562607	576	+	pseudogene	ribosomal protein L9, pseudogene 2
BC053393	11	46571536 to 46589232	17696	+	protein coding gene	cDNA sequence BC053393
Dppa1	11	46607772 to 46629261	21489	-	protein coding gene	developmental pluripotency associated 1
Gm4926	11	46636516 to 46645006	8490	-	lincRNA gene	predicted gene 4926
Gm12173	11	46646687 to 46646959	272	-	pseudogene	predicted gene 12173