Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:46417031-46707607

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2776 11 46436791 to 46437746 955 CpG island CpG island 2776
Tssr101110 11 46436930 to 46436941 11 + TSS region transcription start site region 101110
Med7 11 46436937 to 46442721 5784 + protein coding gene mediator complex subunit 7
Tssr101111 11 46436942 to 46437017 75 + TSS region transcription start site region 101111
Tssr101112 11 46437031 to 46437050 19 + TSS region transcription start site region 101112
Tssr101113 11 46437065 to 46437088 23 + TSS region transcription start site region 101113
Tssr101114 11 46437486 to 46437512 26 + TSS region transcription start site region 101114
2310031A07Rik 11 46440362 to 46447248 6886 - lincRNA gene RIKEN cDNA 2310031A07 gene
Tssr107612 11 46447259 to 46447270 11 - TSS region transcription start site region 107612
Gm12168 11 46450980 to 46451347 367 - pseudogene predicted gene 12168
Tssr107613 11 46451340 to 46451367 27 - TSS region transcription start site region 107613
Tssr101115 11 46454921 to 46454946 25 + TSS region transcription start site region 101115
Havcr2 11 46454935 to 46481255 26320 + protein coding gene hepatitis A virus cellular receptor 2
Tssr101116 11 46454957 to 46454984 27 + TSS region transcription start site region 101116
Tssr101117 11 46479983 to 46479995 12 + TSS region transcription start site region 101117
Tssr101118 11 46480298 to 46480322 24 + TSS region transcription start site region 101118
Gm12169 11 46524251 to 46538156 13905 + protein coding gene predicted gene 12169
Acigg5 11 46528416 to 62992617 16464201 QTL anti COL7 IgG2a/c antibody 5
Gm12170 11 46539782 to 46540081 299 - pseudogene predicted gene 12170
Gm12171 11 46548413 to 46556068 7655 + lincRNA gene predicted gene 12171
Tssr101119 11 46562004 to 46562006 2 + TSS region transcription start site region 101119
Rpl9-ps2 11 46562031 to 46562607 576 + pseudogene ribosomal protein L9, pseudogene 2
BC053393 11 46571536 to 46589232 17696 + protein coding gene cDNA sequence BC053393
Dppa1 11 46607772 to 46629261 21489 - protein coding gene developmental pluripotency associated 1
Gm4926 11 46636516 to 46645006 8490 - lincRNA gene predicted gene 4926
Gm12173 11 46646687 to 46646959 272 - pseudogene predicted gene 12173
Timd2 11 46668960 to 46707061 38101 - protein coding gene T cell immunoglobulin and mucin domain containing 2
Tssr107614 11 46690306 to 46690320 14 - TSS region transcription start site region 107614
Tssr107615 11 46698608 to 46698623 15 - TSS region transcription start site region 107615
Tssr107616 11 46698819 to 46698835 16 - TSS region transcription start site region 107616
Tssr107617 11 46699049 to 46699075 26 - TSS region transcription start site region 107617
Tssr107618 11 46707060 to 46707077 17 - TSS region transcription start site region 107618
Tssr3476 11 46707088 to 46707091 3 - TSS region transcription start site region 3476
Tssr107619 11 46707097 to 46707112 15 - TSS region transcription start site region 107619