Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:45930310-46067994

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lsm11	11	45928269 to 45944935	16666	-	protein coding gene	U7 snRNP-specific Sm-like protein LSM11
Cpgi2768	11	45943989 to 45945198	1209		CpG island	CpG island 2768
Tssr107577	11	45944910 to 45944960	50	-	TSS region	transcription start site region 107577
Thg1l	11	45946843 to 45955494	8651	-	protein coding gene	tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Cpgi2769	11	45955033 to 45955638	605		CpG island	CpG island 2769
Tssr107578	11	45955164 to 45955182	18	-	TSS region	transcription start site region 107578
Tssr107579	11	45955183 to 45955193	10	-	TSS region	transcription start site region 107579
Tssr107580	11	45955426 to 45955437	11	-	TSS region	transcription start site region 107580
Tssr107581	11	45955465 to 45955491	26	-	TSS region	transcription start site region 107581
Gm35497	11	45979039 to 45979844	805	-	lncRNA gene	predicted gene, 35497
Tssr101081	11	45979315 to 45979322	7	+	TSS region	transcription start site region 101081
Cpgi2770	11	45979856 to 45981291	1435		CpG island	CpG island 2770
Tssr101082	11	45980226 to 45980233	7	+	TSS region	transcription start site region 101082
Tssr101083	11	45980255 to 45980273	18	+	TSS region	transcription start site region 101083
Tssr101084	11	45980309 to 45980337	28	+	TSS region	transcription start site region 101084
Sox30	11	45980310 to 46017994	37684	+	protein coding gene	SRY (sex determining region Y)-box 30
Tssr101085	11	45980353 to 45980362	9	+	TSS region	transcription start site region 101085
Tssr101086	11	45981232 to 45981242	10	+	TSS region	transcription start site region 101086
Tssr101087	11	45991717 to 45991759	42	+	TSS region	transcription start site region 101087
Cpgi2771	11	45991818 to 45992014	196		CpG island	CpG island 2771
Gm12165	11	46036440 to 46036781	341	+	pseudogene	predicted gene 12165
Gm12166	11	46051354 to 46052321	967	-	protein coding gene	predicted gene 12166
Cpgi2772	11	46055844 to 46056627	783		CpG island	CpG island 2772
Tssr3474	11	46055947 to 46055967	20	+	TSS region	transcription start site region 3474
Tssr101088	11	46055973 to 46056068	95	+	TSS region	transcription start site region 101088
Adam19	11	46055992 to 46147343	91351	+	protein coding gene	a disintegrin and metallopeptidase domain 19 (meltrin beta)
Tssr101089	11	46056088 to 46056097	9	+	TSS region	transcription start site region 101089
Tssr101090	11	46056165 to 46056175	10	+	TSS region	transcription start site region 101090
Tssr101091	11	46056223 to 46056230	7	+	TSS region	transcription start site region 101091
Cpgi2773	11	46057062 to 46057301	239		CpG island	CpG island 2773
Tssr107582	11	46058109 to 46058132	23	-	TSS region	transcription start site region 107582
Tssr107583	11	46058174 to 46058195	21	-	TSS region	transcription start site region 107583
Tssr101092	11	46060903 to 46060912	9	+	TSS region	transcription start site region 101092