Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:45726997-45977019

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39816 11 45660970 to 45752943 91973 - lncRNA gene predicted gene, 39816
Tssr107573 11 45752943 to 45752976 33 - TSS region transcription start site region 107573
Tssr107574 11 45753609 to 45753614 5 - TSS region transcription start site region 107574
F630206G17Rik 11 45808087 to 45841171 33084 + lncRNA gene RIKEN cDNA F630206G17 gene
Gm12163 11 45813604 to 45813992 388 + pseudogene predicted gene 12163
Mastr 11 45817754 to 89927907 44110153 QTL modifier of astrocytoma
Desp2 11 45817754 to 45817873 119 QTL despair 2
D11Mit271 11 45817754 to 45817873 119 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 271
Tssr101066 11 45829106 to 45829109 3 + TSS region transcription start site region 101066
Gm12164 11 45829319 to 45829869 550 + pseudogene predicted gene 12164
Gm22751 11 45829779 to 45829887 108 + miRNA gene predicted gene, 22751
Cpgi2767 11 45851632 to 45852698 1066 CpG island CpG island 2767
Tssr101067 11 45851933 to 45851946 13 + TSS region transcription start site region 101067
Tssr101068 11 45851955 to 45851996 41 + TSS region transcription start site region 101068
Tssr101069 11 45851997 to 45852019 22 + TSS region transcription start site region 101069
Tssr101070 11 45852031 to 45852032 1 + TSS region transcription start site region 101070
Clint1 11 45852051 to 45910625 58574 + protein coding gene clathrin interactor 1
Tssr3473 11 45852604 to 45852607 3 - TSS region transcription start site region 3473
Tssr107575 11 45852616 to 45852629 13 - TSS region transcription start site region 107575
Tssr101071 11 45852834 to 45852837 3 + TSS region transcription start site region 101071
Tssr101072 11 45856240 to 45856252 12 + TSS region transcription start site region 101072
Tssr101073 11 45856349 to 45856391 42 + TSS region transcription start site region 101073
9530029O12Rik 11 45862916 to 45863654 738 unclassified gene RIKEN cDNA 9530029O12 gene
Tssr101074 11 45886423 to 45886448 25 + TSS region transcription start site region 101074
Tssr107576 11 45887508 to 45887531 23 - TSS region transcription start site region 107576
Tssr101075 11 45890594 to 45890637 43 + TSS region transcription start site region 101075
Tssr101076 11 45890647 to 45890662 15 + TSS region transcription start site region 101076
Tssr101077 11 45890692 to 45890702 10 + TSS region transcription start site region 101077
Tssr101078 11 45893879 to 45893890 11 + TSS region transcription start site region 101078
Tssr101079 11 45893894 to 45893909 15 + TSS region transcription start site region 101079
Tssr101080 11 45904210 to 45904222 12 + TSS region transcription start site region 101080
Lsm11 11 45928269 to 45944935 16666 - protein coding gene U7 snRNP-specific Sm-like protein LSM11
Cpgi2768 11 45943989 to 45945198 1209 CpG island CpG island 2768
Tssr107577 11 45944910 to 45944960 50 - TSS region transcription start site region 107577
Thg1l 11 45946843 to 45955494 8651 - protein coding gene tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
Cpgi2769 11 45955033 to 45955638 605 CpG island CpG island 2769
Tssr107578 11 45955164 to 45955182 18 - TSS region transcription start site region 107578
Tssr107579 11 45955183 to 45955193 10 - TSS region transcription start site region 107579
Tssr107580 11 45955426 to 45955437 11 - TSS region transcription start site region 107580
Tssr107581 11 45955465 to 45955491 26 - TSS region transcription start site region 107581