Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:45637943-45867976

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22284 11 45639383 to 45639514 131 + snoRNA gene predicted gene, 22284
Gm39816 11 45660970 to 45752943 91973 - lncRNA gene predicted gene, 39816
Tssr101064 11 45673198 to 45673200 2 + TSS region transcription start site region 101064
Ppiq7 11 45678320 to 45678320 0 QTL prepulse inhibition QTL 7
Tssr101065 11 45703794 to 45703831 37 + TSS region transcription start site region 101065
Gm35282 11 45703805 to 45720563 16758 + lncRNA gene predicted gene, 35282
Tssr107573 11 45752943 to 45752976 33 - TSS region transcription start site region 107573
Tssr107574 11 45753609 to 45753614 5 - TSS region transcription start site region 107574
F630206G17Rik 11 45808087 to 45841171 33084 + lncRNA gene RIKEN cDNA F630206G17 gene
Gm12163 11 45813604 to 45813992 388 + pseudogene predicted gene 12163
Mastr 11 45817754 to 89927907 44110153 QTL modifier of astrocytoma
D11Mit271 11 45817754 to 45817873 119 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 271
Desp2 11 45817754 to 45817873 119 QTL despair 2
Tssr101066 11 45829106 to 45829109 3 + TSS region transcription start site region 101066
Gm12164 11 45829319 to 45829869 550 + pseudogene predicted gene 12164
Gm22751 11 45829779 to 45829887 108 + miRNA gene predicted gene, 22751
Cpgi2767 11 45851632 to 45852698 1066 CpG island CpG island 2767
Tssr101067 11 45851933 to 45851946 13 + TSS region transcription start site region 101067
Tssr101068 11 45851955 to 45851996 41 + TSS region transcription start site region 101068
Tssr101069 11 45851997 to 45852019 22 + TSS region transcription start site region 101069
Tssr101070 11 45852031 to 45852032 1 + TSS region transcription start site region 101070
Clint1 11 45852051 to 45910625 58574 + protein coding gene clathrin interactor 1
Tssr3473 11 45852604 to 45852607 3 - TSS region transcription start site region 3473
Tssr107575 11 45852616 to 45852629 13 - TSS region transcription start site region 107575
Tssr101071 11 45852834 to 45852837 3 + TSS region transcription start site region 101071
Tssr101072 11 45856240 to 45856252 12 + TSS region transcription start site region 101072
Tssr101073 11 45856349 to 45856391 42 + TSS region transcription start site region 101073
9530029O12Rik 11 45862916 to 45863654 738 unclassified gene RIKEN cDNA 9530029O12 gene