MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:45444383-45834514

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12162	11	45409042 to 45468504	59462	-	lincRNA gene	predicted gene 12162
Tssr107572	11	45465314 to 45465315	1	-	TSS region	transcription start site region 107572
D11Mit189	11	45472169 to 45472300	131		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 189
Gm22284	11	45639383 to 45639514	131	+	snoRNA gene	predicted gene, 22284
Gm39816	11	45660970 to 45752943	91973	-	lncRNA gene	predicted gene, 39816
Tssr101064	11	45673198 to 45673200	2	+	TSS region	transcription start site region 101064
Ppiq7	11	45678320 to 45678320	0		QTL	prepulse inhibition QTL 7
Tssr101065	11	45703794 to 45703831	37	+	TSS region	transcription start site region 101065
Gm35282	11	45703805 to 45720563	16758	+	lncRNA gene	predicted gene, 35282
Tssr107573	11	45752943 to 45752976	33	-	TSS region	transcription start site region 107573
Tssr107574	11	45753609 to 45753614	5	-	TSS region	transcription start site region 107574
F630206G17Rik	11	45808087 to 45841171	33084	+	lncRNA gene	RIKEN cDNA F630206G17 gene
Gm12163	11	45813604 to 45813992	388	+	pseudogene	predicted gene 12163
Desp2	11	45817754 to 45817873	119		QTL	despair 2
Mastr	11	45817754 to 89927907	44110153		QTL	modifier of astrocytoma
D11Mit271	11	45817754 to 45817873	119		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 271
Tssr101066	11	45829106 to 45829109	3	+	TSS region	transcription start site region 101066
Gm12164	11	45829319 to 45829869	550	+	pseudogene	predicted gene 12164
Gm22751	11	45829779 to 45829887	108	+	miRNA gene	predicted gene, 22751