MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:4543805-4643809

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Mtmr3	11	4480868 to 4594862	113994	-	protein coding gene	myotubularin related protein 3
D11Mit72	11	4557896 to 4558058	162		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 72
Gm11960	11	4563627 to 4564612	985	+	pseudogene	predicted gene 11960
Tssr106557	11	4579973 to 4579989	16	-	TSS region	transcription start site region 106557
Tssr106558	11	4593805 to 4593809	4	-	TSS region	transcription start site region 106558
Cpgi2514	11	4594111 to 4595021	910		CpG island	CpG island 2514
Tssr106559	11	4594750 to 4594820	70	-	TSS region	transcription start site region 106559
Tssr106560	11	4594825 to 4594828	3	-	TSS region	transcription start site region 106560
Tssr106561	11	4594857 to 4594875	18	-	TSS region	transcription start site region 106561
Gm11032	11	4620067 to 4621698	1631	+	protein coding gene	predicted gene 11032
Cpgi2515	11	4620262 to 4620506	244		CpG island	CpG island 2515
Gm11961	11	4620275 to 4630011	9736	-	antisense lncRNA gene	predicted gene 11961
Cpgi2516	11	4637582 to 4638028	446		CpG island	CpG island 2516
Tssr100128	11	4637701 to 4637711	10	+	TSS region	transcription start site region 100128
Tssr100129	11	4637719 to 4637726	7	+	TSS region	transcription start site region 100129
Tssr100130	11	4637734 to 4637789	55	+	TSS region	transcription start site region 100130
Ascc2	11	4637747 to 4685699	47952	+	protein coding gene	activating signal cointegrator 1 complex subunit 2
Eae44a	11	21429532 to 4557896	-16871636		QTL	experimental allergic encephalomyelitis susceptibility 44a