MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:44950943-45423656

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ebf1	11	44618100 to 45008096	389996	+	protein coding gene	early B cell factor 1
Tssr101058	11	44962904 to 44962910	6	+	TSS region	transcription start site region 101058
Tssr101059	11	44962929 to 44962935	6	+	TSS region	transcription start site region 101059
Tssr101060	11	44962936 to 44962946	10	+	TSS region	transcription start site region 101060
Tssr101061	11	45005088 to 45005096	8	+	TSS region	transcription start site region 101061
Tssr101062	11	45006122 to 45006131	9	+	TSS region	transcription start site region 101062
Tssr101063	11	45006829 to 45006869	40	+	TSS region	transcription start site region 101063
Gm12159	11	45102866 to 45116928	14062	-	lincRNA gene	predicted gene 12159
Gm12160	11	45160943 to 45213656	52713	+	lincRNA gene	predicted gene 12160
Gm38087	11	45189570 to 45189872	302	-	unclassified gene	predicted gene, 38087
Gm37312	11	45274418 to 45296390	21972	-	unclassified gene	predicted gene, 37312
Si5lq5	11	45275046 to 45275149	103		QTL	serum IGFBP-5 level QTL 5
D11Mit236	11	45275046 to 45275149	103		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 236
Nidd1n	11	45275046 to 80087498	34812452		QTL	non-insulin-dependent diabetes mellitus 1 in NSY
D11Dcr9	11	45275057 to 45275159	102		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 9
Gm12161	11	45280594 to 45280954	360	-	pseudogene	predicted gene 12161
D11Mit188	11	45332932 to 45333057	125		DNA segment	DNA segment, Chr 11, Massachusetts Institute of Technology 188
Gm12162	11	45409042 to 45468504	59462	-	lincRNA gene	predicted gene 12162