Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:44765594-45795954

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ebf1 11 44618100 to 45008096 389996 + protein coding gene early B cell factor 1
D11Mit130 11 44822544 to 44822743 199 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 130
D11Dcr8 11 44905350 to 44905446 96 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 8
Tssr101057 11 44926208 to 44926213 5 + TSS region transcription start site region 101057
Tssr107571 11 44950400 to 44950408 8 - TSS region transcription start site region 107571
Tssr101058 11 44962904 to 44962910 6 + TSS region transcription start site region 101058
Tssr101059 11 44962929 to 44962935 6 + TSS region transcription start site region 101059
Tssr101060 11 44962936 to 44962946 10 + TSS region transcription start site region 101060
Tssr101061 11 45005088 to 45005096 8 + TSS region transcription start site region 101061
Tssr101062 11 45006122 to 45006131 9 + TSS region transcription start site region 101062
Tssr101063 11 45006829 to 45006869 40 + TSS region transcription start site region 101063
Gm12159 11 45102866 to 45116928 14062 - lincRNA gene predicted gene 12159
Gm12160 11 45160943 to 45213656 52713 + lincRNA gene predicted gene 12160
Gm38087 11 45189570 to 45189872 302 - unclassified gene predicted gene, 38087
Gm37312 11 45274418 to 45296390 21972 - unclassified gene predicted gene, 37312
Nidd1n 11 45275046 to 80087498 34812452 QTL non-insulin-dependent diabetes mellitus 1 in NSY
D11Mit236 11 45275046 to 45275149 103 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 236
Si5lq5 11 45275046 to 45275149 103 QTL serum IGFBP-5 level QTL 5
D11Dcr9 11 45275057 to 45275159 102 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 9
Gm12161 11 45280594 to 45280954 360 - pseudogene predicted gene 12161
D11Mit188 11 45332932 to 45333057 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 188
Gm12162 11 45409042 to 45468504 59462 - lincRNA gene predicted gene 12162
Tssr107572 11 45465314 to 45465315 1 - TSS region transcription start site region 107572
D11Mit189 11 45472169 to 45472300 131 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 189
Gm22284 11 45639383 to 45639514 131 + snoRNA gene predicted gene, 22284
Gm39816 11 45660970 to 45752943 91973 - lncRNA gene predicted gene, 39816
Tssr101064 11 45673198 to 45673200 2 + TSS region transcription start site region 101064
Ppiq7 11 45678320 to 45678320 0 QTL prepulse inhibition QTL 7
Tssr101065 11 45703794 to 45703831 37 + TSS region transcription start site region 101065
Gm35282 11 45703805 to 45720563 16758 + lncRNA gene predicted gene, 35282
Tssr107573 11 45752943 to 45752976 33 - TSS region transcription start site region 107573
Tssr107574 11 45753609 to 45753614 5 - TSS region transcription start site region 107574