Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:44715594-45845954

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ebf1 11 44618100 to 45008096 389996 + protein coding gene early B cell factor 1
9530018D06Rik 11 44725925 to 44727383 1458 unclassified gene RIKEN cDNA 9530018D06 gene
Tssr3472 11 44735311 to 44735325 14 + TSS region transcription start site region 3472
9630023C09Rik 11 44736044 to 44742253 6209 unclassified gene RIKEN cDNA 9630023C09 gene
D11Mit20.1 11 44739059 to 44739219 160 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 20.1
D11Mit20 11 44739211 to 44739324 113 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 20
Ctrq3 11 44739211 to 76963931 32224720 QTL C. trachomatis resistance QTL 3
Cpgi2766 11 44741055 to 44741247 192 CpG island CpG island 2766
D11Mit270 11 44743447 to 44743571 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 270
D11Mit130 11 44822544 to 44822743 199 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 130
D11Dcr8 11 44905350 to 44905446 96 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 8
Tssr101057 11 44926208 to 44926213 5 + TSS region transcription start site region 101057
Tssr107571 11 44950400 to 44950408 8 - TSS region transcription start site region 107571
Tssr101058 11 44962904 to 44962910 6 + TSS region transcription start site region 101058
Tssr101059 11 44962929 to 44962935 6 + TSS region transcription start site region 101059
Tssr101060 11 44962936 to 44962946 10 + TSS region transcription start site region 101060
Tssr101061 11 45005088 to 45005096 8 + TSS region transcription start site region 101061
Tssr101062 11 45006122 to 45006131 9 + TSS region transcription start site region 101062
Tssr101063 11 45006829 to 45006869 40 + TSS region transcription start site region 101063
Gm12159 11 45102866 to 45116928 14062 - lincRNA gene predicted gene 12159
Gm12160 11 45160943 to 45213656 52713 + lincRNA gene predicted gene 12160
Gm38087 11 45189570 to 45189872 302 - unclassified gene predicted gene, 38087
Gm37312 11 45274418 to 45296390 21972 - unclassified gene predicted gene, 37312
Si5lq5 11 45275046 to 45275149 103 QTL serum IGFBP-5 level QTL 5
D11Mit236 11 45275046 to 45275149 103 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 236
Nidd1n 11 45275046 to 80087498 34812452 QTL non-insulin-dependent diabetes mellitus 1 in NSY
D11Dcr9 11 45275057 to 45275159 102 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 9
Gm12161 11 45280594 to 45280954 360 - pseudogene predicted gene 12161
D11Mit188 11 45332932 to 45333057 125 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 188
Gm12162 11 45409042 to 45468504 59462 - lincRNA gene predicted gene 12162
Tssr107572 11 45465314 to 45465315 1 - TSS region transcription start site region 107572
D11Mit189 11 45472169 to 45472300 131 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 189
Gm22284 11 45639383 to 45639514 131 + snoRNA gene predicted gene, 22284
Gm39816 11 45660970 to 45752943 91973 - lncRNA gene predicted gene, 39816
Tssr101064 11 45673198 to 45673200 2 + TSS region transcription start site region 101064
Ppiq7 11 45678320 to 45678320 0 QTL prepulse inhibition QTL 7
Tssr101065 11 45703794 to 45703831 37 + TSS region transcription start site region 101065
Gm35282 11 45703805 to 45720563 16758 + lncRNA gene predicted gene, 35282
Tssr107573 11 45752943 to 45752976 33 - TSS region transcription start site region 107573
Tssr107574 11 45753609 to 45753614 5 - TSS region transcription start site region 107574
F630206G17Rik 11 45808087 to 45841171 33084 + lncRNA gene RIKEN cDNA F630206G17 gene
Gm12163 11 45813604 to 45813992 388 + pseudogene predicted gene 12163
Mastr 11 45817754 to 89927907 44110153 QTL modifier of astrocytoma
Desp2 11 45817754 to 45817873 119 QTL despair 2
D11Mit271 11 45817754 to 45817873 119 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 271
Tssr101066 11 45829106 to 45829109 3 + TSS region transcription start site region 101066
Gm12164 11 45829319 to 45829869 550 + pseudogene predicted gene 12164
Gm22751 11 45829779 to 45829887 108 + miRNA gene predicted gene, 22751
Inf1 11 113167183 to 44739211 -68427972 QTL acute ozone induced inflammation