Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:44168721-44578868

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa7 11 26061780 to 44373868 18312088 QTL B.burgdorferi-associated arthritis 7
Alcw9 11 35687789 to 44175104 8487315 QTL alcohol withdrawal 9
Zolw1 11 35687789 to 44175104 8487315 QTL zolpidem withdrawal 1
Pbw3 11 35687789 to 44175104 8487315 QTL pentobarbital withdrawal QTL 3
D11Mit21 11 44174948 to 44175104 156 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 21
Tssr101013 11 44215586 to 44215602 16 + TSS region transcription start site region 101013
Tssr101014 11 44215623 to 44215653 30 + TSS region transcription start site region 101014
Tssr107565 11 44260505 to 44260524 19 - TSS region transcription start site region 107565
Gm12154 11 44265563 to 44267209 1646 - lincRNA gene predicted gene 12154
D11Mit235 11 44373689 to 44373868 179 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 235
D11Mit237 11 44373721 to 44373868 147 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 237
Gm12155 11 44387115 to 44387274 159 - pseudogene predicted gene 12155
Cpgi2756 11 44398967 to 44399255 288 CpG island CpG island 2756
Tssr101015 11 44399980 to 44399989 9 + TSS region transcription start site region 101015
Tssr101016 11 44400060 to 44400066 6 + TSS region transcription start site region 101016
Il12b 11 44400063 to 44414033 13970 + protein coding gene interleukin 12b
Tssr101017 11 44414100 to 44414112 12 + TSS region transcription start site region 101017
Gm42073 11 44435173 to 44452492 17319 - lncRNA gene predicted gene, 42073
Ublcp1 11 44454571 to 44470498 15927 - protein coding gene ubiquitin-like domain containing CTD phosphatase 1
Gm22121 11 44469013 to 44469066 53 + miRNA gene predicted gene, 22121
Cpgi2757 11 44469791 to 44470996 1205 CpG island CpG island 2757
Tssr101018 11 44469910 to 44469926 16 + TSS region transcription start site region 101018
Tssr107566 11 44470442 to 44470459 17 - TSS region transcription start site region 107566
Tssr107567 11 44470464 to 44470513 49 - TSS region transcription start site region 107567
Tssr101019 11 44470579 to 44470606 27 + TSS region transcription start site region 101019
Gm12156 11 44479824 to 44480562 738 + pseudogene predicted gene 12156
Tssr107568 11 44496293 to 44496311 18 - TSS region transcription start site region 107568
Gm46258 11 44509114 to 44511443 2329 + lncRNA gene predicted gene, 46258
Cpgi2758 11 44518474 to 44519861 1387 CpG island CpG island 2758
Tssr101020 11 44518517 to 44518536 19 + TSS region transcription start site region 101020
Tssr101021 11 44518953 to 44518958 5 + TSS region transcription start site region 101021
Tssr101022 11 44518959 to 44519000 41 + TSS region transcription start site region 101022
Rnf145 11 44518964 to 44565520 46556 + protein coding gene ring finger protein 145
Tssr101023 11 44519405 to 44519450 45 + TSS region transcription start site region 101023
Tssr101024 11 44519457 to 44519478 21 + TSS region transcription start site region 101024
Cpgi2759 11 44519932 to 44520300 368 CpG island CpG island 2759
Tssr101025 11 44520334 to 44520343 9 + TSS region transcription start site region 101025
Tssr101026 11 44520402 to 44520440 38 + TSS region transcription start site region 101026
Tssr101027 11 44538054 to 44538058 4 + TSS region transcription start site region 101027
Tssr107569 11 44574795 to 44574799 4 - TSS region transcription start site region 107569
Tssr101028 11 44575214 to 44575218 4 + TSS region transcription start site region 101028