Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:43464602-43696116

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2748 11 43474013 to 43474470 457 CpG island CpG island 2748
Tssr100996 11 43474257 to 43474267 10 + TSS region transcription start site region 100996
Tssr100997 11 43474281 to 43474340 59 + TSS region transcription start site region 100997
C1qtnf2 11 43474306 to 43491525 17219 + protein coding gene C1q and tumor necrosis factor related protein 2
Cpgi2749 11 43490864 to 43491314 450 CpG island CpG island 2749
Cpgi2750 11 43528254 to 43529590 1336 CpG island CpG island 2750
Tssr100998 11 43528759 to 43528796 37 + TSS region transcription start site region 100998
Ccnjl 11 43528784 to 43586997 58213 + protein coding gene cyclin J-like
Tssr100999 11 43528805 to 43528820 15 + TSS region transcription start site region 100999
Gm12150 11 43579602 to 43581116 1514 - antisense lncRNA gene predicted gene 12150
4933415A04Rik 11 43587040 to 43589048 2008 + unclassified gene RIKEN cDNA 4933415A04 gene
Tssr101000 11 43587068 to 43587072 4 + TSS region transcription start site region 101000
Tssr101001 11 43594544 to 43594569 25 + TSS region transcription start site region 101001
Fabp6 11 43596049 to 43601540 5491 - protein coding gene fatty acid binding protein 6
Tssr101002 11 43596078 to 43596089 11 + TSS region transcription start site region 101002
Tssr101003 11 43598569 to 43598591 22 + TSS region transcription start site region 101003
Tssr107554 11 43598637 to 43598647 10 - TSS region transcription start site region 107554
Tssr101004 11 43598668 to 43598689 21 + TSS region transcription start site region 101004
Tssr107555 11 43598670 to 43598675 5 - TSS region transcription start site region 107555
Tssr107556 11 43598713 to 43598717 4 - TSS region transcription start site region 107556
Tssr107557 11 43601551 to 43601567 16 - TSS region transcription start site region 107557
Gm12149 11 43615117 to 43616329 1212 - pseudogene predicted gene 12149
Tssr101005 11 43632804 to 43632819 15 + TSS region transcription start site region 101005
Tssr101006 11 43632829 to 43632851 22 + TSS region transcription start site region 101006
Gm12152 11 43670801 to 43671484 683 + pseudogene predicted gene 12152
Gm34963 11 43675739 to 43681991 6252 - lncRNA gene predicted gene, 34963
Cpgi2751 11 43681633 to 43683022 1389 CpG island CpG island 2751
Pwwp2a 11 43681998 to 43721491 39493 + protein coding gene PWWP domain containing 2A
Tssr101007 11 43682011 to 43682036 25 + TSS region transcription start site region 101007
Tssr101008 11 43682038 to 43682060 22 + TSS region transcription start site region 101008
Tssr101009 11 43682066 to 43682089 23 + TSS region transcription start site region 101009
Tssr107558 11 43682656 to 43682687 31 - TSS region transcription start site region 107558