Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:42359015-43378546

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm34591 11 42411499 to 42421222 9723 - lncRNA gene predicted gene, 34591
Cpgi2743 11 42418498 to 42418853 355 CpG island CpG island 2743
Tssr100974 11 42419701 to 42419719 18 + TSS region transcription start site region 100974
Tssr100975 11 42419729 to 42419785 56 + TSS region transcription start site region 100975
Gabrb2 11 42419757 to 42629028 209271 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
Cpgi2744 11 42419827 to 42420503 676 CpG island CpG island 2744
Tssr100976 11 42419937 to 42419955 18 + TSS region transcription start site region 100976
Tssr100977 11 42420437 to 42420443 6 + TSS region transcription start site region 100977
Tssr100978 11 42420758 to 42420779 21 + TSS region transcription start site region 100978
Tssr100979 11 42420829 to 42420855 26 + TSS region transcription start site region 100979
Tssr100980 11 42421233 to 42421240 7 + TSS region transcription start site region 100980
Tssr100981 11 42421258 to 42421284 26 + TSS region transcription start site region 100981
Tssr100982 11 42421285 to 42421321 36 + TSS region transcription start site region 100982
Tssr100983 11 42421322 to 42421333 11 + TSS region transcription start site region 100983
D11Mit308 11 42465288 to 42465389 101 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 308
Tssr100984 11 42466996 to 42466999 3 + TSS region transcription start site region 100984
D11Mit174 11 42593949 to 42594095 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 174
Tssr100985 11 42630435 to 42630439 4 + TSS region transcription start site region 100985
D11Mit269 11 42757501 to 42757625 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 269
D11Mit347 11 42834683 to 42834876 193 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 347
Gm34644 11 42864015 to 42873546 9531 - lncRNA gene predicted gene, 34644
D11Mit296 11 42881799 to 42881914 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 296
Hbnr13 11 42881799 to 42881914 115 QTL Heligmosomoides bakeri nematode resistance 13
Vmbic10 11 42881799 to 54190238 11308439 QTL ventral midbrain iron content 10
Gm25543 11 42897495 to 42897806 311 + unclassified non-coding RNA gene predicted gene, 25543
Tssr100986 11 42939630 to 42939634 4 + TSS region transcription start site region 100986
D11Mit367 11 42950879 to 42951041 162 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-367
Tssr100987 11 43012164 to 43012187 23 + TSS region transcription start site region 100987
Gm9972 11 43035746 to 43037278 1532 + protein coding gene predicted gene 9972
Tssr100988 11 43068412 to 43068418 6 + TSS region transcription start site region 100988
Gm12145 11 43106140 to 43116294 10154 - lincRNA gene predicted gene 12145
Atp10b 11 43149877 to 43262285 112408 + protein coding gene ATPase, class V, type 10B
D11Mit1001 11 43153557 to 43153667 110 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1001
Tssr100989 11 43155648 to 43155704 56 + TSS region transcription start site region 100989
Tssr100990 11 43155706 to 43155718 12 + TSS region transcription start site region 100990
Tssr100991 11 43155781 to 43155784 3 + TSS region transcription start site region 100991
Tssr107526 11 43157805 to 43157822 17 - TSS region transcription start site region 107526
Gm12146 11 43197522 to 43222142 24620 - antisense lncRNA gene predicted gene 12146
D11Mit234 11 43199453 to 43199568 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 234
Gm12144 11 43229563 to 43232264 2701 - antisense lncRNA gene predicted gene 12144
Tssr107527 11 43232262 to 43232279 17 - TSS region transcription start site region 107527
Gm12147 11 43259791 to 43311088 51297 - antisense lncRNA gene predicted gene 12147
Tssr107528 11 43311059 to 43311070 11 - TSS region transcription start site region 107528
Tssr107529 11 43311110 to 43311111 1 - TSS region transcription start site region 107529
Tssr107530 11 43311135 to 43311145 10 - TSS region transcription start site region 107530
Tssr107531 11 43374393 to 43374399 6 - TSS region transcription start site region 107531
Mir146 11 43374397 to 43374461 64 - miRNA gene microRNA 146
Tssr107532 11 43375957 to 43375982 25 - TSS region transcription start site region 107532