Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:42243949-42944095

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gabra6 11 42306437 to 42321072 14635 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
Tssr107522 11 42321017 to 42321039 22 - TSS region transcription start site region 107522
Tssr107523 11 42321045 to 42321056 11 - TSS region transcription start site region 107523
Tssr107524 11 42321058 to 42321072 14 - TSS region transcription start site region 107524
Tssr107525 11 42321074 to 42321083 9 - TSS region transcription start site region 107525
Gm34591 11 42411499 to 42421222 9723 - lncRNA gene predicted gene, 34591
Cpgi2743 11 42418498 to 42418853 355 CpG island CpG island 2743
Tssr100974 11 42419701 to 42419719 18 + TSS region transcription start site region 100974
Tssr100975 11 42419729 to 42419785 56 + TSS region transcription start site region 100975
Gabrb2 11 42419757 to 42629028 209271 + protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
Cpgi2744 11 42419827 to 42420503 676 CpG island CpG island 2744
Tssr100976 11 42419937 to 42419955 18 + TSS region transcription start site region 100976
Tssr100977 11 42420437 to 42420443 6 + TSS region transcription start site region 100977
Tssr100978 11 42420758 to 42420779 21 + TSS region transcription start site region 100978
Tssr100979 11 42420829 to 42420855 26 + TSS region transcription start site region 100979
Tssr100980 11 42421233 to 42421240 7 + TSS region transcription start site region 100980
Tssr100981 11 42421258 to 42421284 26 + TSS region transcription start site region 100981
Tssr100982 11 42421285 to 42421321 36 + TSS region transcription start site region 100982
Tssr100983 11 42421322 to 42421333 11 + TSS region transcription start site region 100983
D11Mit308 11 42465288 to 42465389 101 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 308
Tssr100984 11 42466996 to 42466999 3 + TSS region transcription start site region 100984
D11Mit174 11 42593949 to 42594095 146 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 174
Tssr100985 11 42630435 to 42630439 4 + TSS region transcription start site region 100985
D11Mit269 11 42757501 to 42757625 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 269
D11Mit347 11 42834683 to 42834876 193 DNA segment DNA Segment, Chr 11 Massachusetts Institute of Technology 347
Gm34644 11 42864015 to 42873546 9531 - lncRNA gene predicted gene, 34644
Hbnr13 11 42881799 to 42881914 115 QTL Heligmosomoides bakeri nematode resistance 13
Vmbic10 11 42881799 to 54190238 11308439 QTL ventral midbrain iron content 10
D11Mit296 11 42881799 to 42881914 115 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 296
Gm25543 11 42897495 to 42897806 311 + unclassified non-coding RNA gene predicted gene, 25543
Tssr100986 11 42939630 to 42939634 4 + TSS region transcription start site region 100986