MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:4140354-4202541

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf215	11	4135202 to 4141172	5970	+	protein coding gene	ring finger protein 215
Ccdc157	11	4141123 to 4160293	19170	-	protein coding gene	coiled-coil domain containing 157
Cpgi2507	11	4160077 to 4160740	663		CpG island	CpG island 2507
Tssr106541	11	4160218 to 4160231	13	-	TSS region	transcription start site region 106541
Tssr106542	11	4160232 to 4160282	50	-	TSS region	transcription start site region 106542
Tssr106543	11	4160286 to 4160305	19	-	TSS region	transcription start site region 106543
Tssr100096	11	4160348 to 4160404	56	+	TSS region	transcription start site region 100096
Sf3a1	11	4160354 to 4182541	22187	+	protein coding gene	splicing factor 3a, subunit 1
Tssr3411	11	4160425 to 4160427	2	+	TSS region	transcription start site region 3411
Tssr100097	11	4160508 to 4160518	10	+	TSS region	transcription start site region 100097
Tssr100098	11	4161094 to 4161119	25	+	TSS region	transcription start site region 100098
Tssr100099	11	4175054 to 4175078	24	+	TSS region	transcription start site region 100099
Tssr100100	11	4178112 to 4178140	28	+	TSS region	transcription start site region 100100
Cpgi2508	11	4186396 to 4187674	1278		CpG island	CpG island 2508
Tssr100101	11	4186807 to 4186865	58	+	TSS region	transcription start site region 100101
Tbc1d10a	11	4186833 to 4215507	28674	+	protein coding gene	TBC1 domain family, member 10a
Tssr100102	11	4186866 to 4186877	11	+	TSS region	transcription start site region 100102
D11Dcr2	11	4194818 to 4194911	93		DNA segment	DNA Segment, Chr 11, Derry C. Roopenian 2