Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:40993693-42003727

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm24446 11 41034968 to 41035123 155 - snRNA gene predicted gene, 24446
Hmgb1-ps1 11 41141763 to 41142396 633 + pseudogene high mobility group box 1, pseudogene 1
Platr13 11 41218837 to 41221096 2259 + lincRNA gene pluripotency associated transcript 13
D11Mit136 11 41228839 to 41229034 195 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 136
Gm18477 11 41230594 to 41231099 505 - pseudogene predicted gene, 18477
Gm12140 11 41378078 to 41378621 543 + pseudogene predicted gene 12140
Tssr100970 11 41498673 to 41498687 14 + TSS region transcription start site region 100970
Tssr100971 11 41498693 to 41498727 34 + TSS region transcription start site region 100971
Hspd1-ps3 11 41498737 to 41500458 1721 + pseudogene heat shock protein 1 (chaperonin), pseudogene 3
Tssr100972 11 41499136 to 41499140 4 + TSS region transcription start site region 100972
Tssr100973 11 41591010 to 41591015 5 + TSS region transcription start site region 100973
Gm12142 11 41591122 to 41592034 912 + pseudogene predicted gene 12142
A230004M16Rik 11 41710344 to 41968788 258444 + lncRNA gene RIKEN cDNA A230004M16 gene
Gm12143 11 41789488 to 41789819 331 - pseudogene predicted gene 12143
Gabrg2 11 41910190 to 42000840 90650 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Tssr107498 11 42000268 to 42000279 11 - TSS region transcription start site region 107498
Tssr107499 11 42000284 to 42000342 58 - TSS region transcription start site region 107499
Tssr107500 11 42000472 to 42000481 9 - TSS region transcription start site region 107500
Tssr107501 11 42000538 to 42000592 54 - TSS region transcription start site region 107501
Tssr107502 11 42000669 to 42000676 7 - TSS region transcription start site region 107502
Tssr107503 11 42000782 to 42000801 19 - TSS region transcription start site region 107503
Tssr107504 11 42000834 to 42000867 33 - TSS region transcription start site region 107504
Tssr107505 11 42000869 to 42000887 18 - TSS region transcription start site region 107505