Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:4095508-4225518

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2503 11 4094757 to 4095528 771 CpG island CpG island 2503
Cpgi2504 11 4096428 to 4097051 623 CpG island CpG island 2504
Tssr100092 11 4096853 to 4096905 52 + TSS region transcription start site region 100092
Sec14l2 11 4097039 to 4118729 21690 - protein coding gene SEC14-like lipid binding 2
Tssr106533 11 4103797 to 4103801 4 - TSS region transcription start site region 106533
Tssr106534 11 4104813 to 4104824 11 - TSS region transcription start site region 106534
Gm11955 11 4107755 to 4108224 469 + pseudogene predicted gene 11955
Tssr106535 11 4116711 to 4116744 33 - TSS region transcription start site region 106535
Cpgi2505 11 4118300 to 4119167 867 CpG island CpG island 2505
Tssr106536 11 4118698 to 4118705 7 - TSS region transcription start site region 106536
Tssr106537 11 4118723 to 4118769 46 - TSS region transcription start site region 106537
Tssr106538 11 4118778 to 4118790 12 - TSS region transcription start site region 106538
Tssr100093 11 4121487 to 4121499 12 + TSS region transcription start site region 100093
Tssr106539 11 4123414 to 4123424 10 - TSS region transcription start site region 106539
Gm11957 11 4129372 to 4130150 778 - pseudogene predicted gene 11957
Cpgi2506 11 4134687 to 4135983 1296 CpG island CpG island 2506
Tssr100094 11 4135167 to 4135222 55 + TSS region transcription start site region 100094
Rnf215 11 4135202 to 4141172 5970 + protein coding gene ring finger protein 215
Tssr100095 11 4135233 to 4135246 13 + TSS region transcription start site region 100095
Tssr106540 11 4135354 to 4135357 3 - TSS region transcription start site region 106540
Mir3060 11 4139364 to 4139446 82 + miRNA gene microRNA 3060
Ccdc157 11 4141123 to 4160293 19170 - protein coding gene coiled-coil domain containing 157
Cpgi2507 11 4160077 to 4160740 663 CpG island CpG island 2507
Tssr106541 11 4160218 to 4160231 13 - TSS region transcription start site region 106541
Tssr106542 11 4160232 to 4160282 50 - TSS region transcription start site region 106542
Tssr106543 11 4160286 to 4160305 19 - TSS region transcription start site region 106543
Tssr100096 11 4160348 to 4160404 56 + TSS region transcription start site region 100096
Sf3a1 11 4160354 to 4182541 22187 + protein coding gene splicing factor 3a, subunit 1
Tssr3411 11 4160425 to 4160427 2 + TSS region transcription start site region 3411
Tssr100097 11 4160508 to 4160518 10 + TSS region transcription start site region 100097
Tssr100098 11 4161094 to 4161119 25 + TSS region transcription start site region 100098
Tssr100099 11 4175054 to 4175078 24 + TSS region transcription start site region 100099
Tssr100100 11 4178112 to 4178140 28 + TSS region transcription start site region 100100
Cpgi2508 11 4186396 to 4187674 1278 CpG island CpG island 2508
Tssr100101 11 4186807 to 4186865 58 + TSS region transcription start site region 100101
Tbc1d10a 11 4186833 to 4215507 28674 + protein coding gene TBC1 domain family, member 10a
Tssr100102 11 4186866 to 4186877 11 + TSS region transcription start site region 100102
D11Dcr2 11 4194818 to 4194911 93 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 2
Cpgi2509 11 4217914 to 4218681 767 CpG island CpG island 2509
Tssr100103 11 4218220 to 4218249 29 + TSS region transcription start site region 100103
Castor1 11 4218225 to 4222409 4184 + protein coding gene cytosolic arginine sensor for mTORC1 subunit 1
Tssr100104 11 4218255 to 4218279 24 + TSS region transcription start site region 100104
Tssr100105 11 4220702 to 4220742 40 + TSS region transcription start site region 100105
Tssr100106 11 4223619 to 4223638 19 + TSS region transcription start site region 100106
Tssr100107 11 4223642 to 4223653 11 + TSS region transcription start site region 100107
Tssr100108 11 4223692 to 4223710 18 + TSS region transcription start site region 100108