Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:40833693-42163727

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D11Mit268 11 40885736 to 40885873 137 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 268
Gm24446 11 41034968 to 41035123 155 - snRNA gene predicted gene, 24446
Hmgb1-ps1 11 41141763 to 41142396 633 + pseudogene high mobility group box 1, pseudogene 1
Platr13 11 41218837 to 41221096 2259 + lincRNA gene pluripotency associated transcript 13
D11Mit136 11 41228839 to 41229034 195 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 136
Gm18477 11 41230594 to 41231099 505 - pseudogene predicted gene, 18477
Gm12140 11 41378078 to 41378621 543 + pseudogene predicted gene 12140
Tssr100970 11 41498673 to 41498687 14 + TSS region transcription start site region 100970
Tssr100971 11 41498693 to 41498727 34 + TSS region transcription start site region 100971
Hspd1-ps3 11 41498737 to 41500458 1721 + pseudogene heat shock protein 1 (chaperonin), pseudogene 3
Tssr100972 11 41499136 to 41499140 4 + TSS region transcription start site region 100972
Tssr100973 11 41591010 to 41591015 5 + TSS region transcription start site region 100973
Gm12142 11 41591122 to 41592034 912 + pseudogene predicted gene 12142
A230004M16Rik 11 41710344 to 41968788 258444 + lncRNA gene RIKEN cDNA A230004M16 gene
Gm12143 11 41789488 to 41789819 331 - pseudogene predicted gene 12143
Gabrg2 11 41910190 to 42000840 90650 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
Tssr107498 11 42000268 to 42000279 11 - TSS region transcription start site region 107498
Tssr107499 11 42000284 to 42000342 58 - TSS region transcription start site region 107499
Tssr107500 11 42000472 to 42000481 9 - TSS region transcription start site region 107500
Tssr107501 11 42000538 to 42000592 54 - TSS region transcription start site region 107501
Tssr107502 11 42000669 to 42000676 7 - TSS region transcription start site region 107502
Tssr107503 11 42000782 to 42000801 19 - TSS region transcription start site region 107503
Tssr107504 11 42000834 to 42000867 33 - TSS region transcription start site region 107504
Tssr107505 11 42000869 to 42000887 18 - TSS region transcription start site region 107505
Gabra1 11 42130939 to 42182930 51991 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Tssr107506 11 42133492 to 42133531 39 - TSS region transcription start site region 107506
Tssr107507 11 42133684 to 42133711 27 - TSS region transcription start site region 107507