Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:40703839-41754034

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Hmmr 11 40701395 to 40733422 32027 - protein coding gene hyaluronan mediated motility receptor (RHAMM)
Cpgi2740 11 40733121 to 40734265 1144 CpG island CpG island 2740
Tssr107484 11 40733373 to 40733442 69 - TSS region transcription start site region 107484
Tssr100961 11 40733622 to 40733631 9 + TSS region transcription start site region 100961
Tssr100962 11 40733639 to 40733703 64 + TSS region transcription start site region 100962
Nudcd2 11 40733667 to 40740046 6379 + protein coding gene NudC domain containing 2
Tssr100963 11 40733727 to 40733762 35 + TSS region transcription start site region 100963
Tssr100964 11 40733877 to 40733931 54 + TSS region transcription start site region 100964
Tssr100965 11 40733936 to 40733947 11 + TSS region transcription start site region 100965
Tssr100966 11 40734093 to 40734157 64 + TSS region transcription start site region 100966
Tssr100967 11 40734171 to 40734191 20 + TSS region transcription start site region 100967
Tssr107485 11 40737337 to 40737348 11 - TSS region transcription start site region 107485
Ccng1 11 40748552 to 40755311 6759 - protein coding gene cyclin G1
Tssr107486 11 40750346 to 40750398 52 - TSS region transcription start site region 107486
Tssr107487 11 40750403 to 40750432 29 - TSS region transcription start site region 107487
Tssr107488 11 40750693 to 40750707 14 - TSS region transcription start site region 107488
Tssr107489 11 40750708 to 40750728 20 - TSS region transcription start site region 107489
Tssr107490 11 40751042 to 40751055 13 - TSS region transcription start site region 107490
Tssr107491 11 40751338 to 40751351 13 - TSS region transcription start site region 107491
Tssr107492 11 40752322 to 40752355 33 - TSS region transcription start site region 107492
Tssr107493 11 40753889 to 40753921 32 - TSS region transcription start site region 107493
Cpgi2741 11 40754786 to 40755500 714 CpG island CpG island 2741
Tssr107494 11 40755176 to 40755187 11 - TSS region transcription start site region 107494
Tssr107495 11 40755201 to 40755288 87 - TSS region transcription start site region 107495
Tssr107496 11 40755445 to 40755464 19 - TSS region transcription start site region 107496
Tssr100968 11 40755445 to 40755466 21 + TSS region transcription start site region 100968
Tssr107497 11 40755475 to 40755486 11 - TSS region transcription start site region 107497
Tssr100969 11 40755476 to 40755501 25 + TSS region transcription start site region 100969
D11Mit267 11 40826851 to 40826965 114 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 267
D11Mit268 11 40885736 to 40885873 137 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 268
Gm24446 11 41034968 to 41035123 155 - snRNA gene predicted gene, 24446
Hmgb1-ps1 11 41141763 to 41142396 633 + pseudogene high mobility group box 1, pseudogene 1
Platr13 11 41218837 to 41221096 2259 + lincRNA gene pluripotency associated transcript 13
D11Mit136 11 41228839 to 41229034 195 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 136
Gm18477 11 41230594 to 41231099 505 - pseudogene predicted gene, 18477
Gm12140 11 41378078 to 41378621 543 + pseudogene predicted gene 12140
Tssr100970 11 41498673 to 41498687 14 + TSS region transcription start site region 100970
Tssr100971 11 41498693 to 41498727 34 + TSS region transcription start site region 100971
Hspd1-ps3 11 41498737 to 41500458 1721 + pseudogene heat shock protein 1 (chaperonin), pseudogene 3
Tssr100972 11 41499136 to 41499140 4 + TSS region transcription start site region 100972
Tssr100973 11 41591010 to 41591015 5 + TSS region transcription start site region 100973
Gm12142 11 41591122 to 41592034 912 + pseudogene predicted gene 12142
A230004M16Rik 11 41710344 to 41968788 258444 + lncRNA gene RIKEN cDNA A230004M16 gene