Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:40219718-40730677

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12132 11 40008194 to 40337831 329637 + lincRNA gene predicted gene 12132
Tssr100958 11 40355384 to 40355393 9 + TSS region transcription start site region 100958
Tssr3466 11 40364696 to 40364701 5 + TSS region transcription start site region 3466
D11Mit218 11 40379825 to 40379968 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 218
Gm12133 11 40422693 to 40423254 561 - pseudogene predicted gene 12133
Gm34173 11 40425465 to 40429738 4273 - lncRNA gene predicted gene, 34173
Gm12134 11 40429537 to 40430056 519 + pseudogene predicted gene 12134
Tssr107472 11 40429745 to 40429748 3 - TSS region transcription start site region 107472
Tssr100959 11 40429842 to 40429844 2 + TSS region transcription start site region 100959
Tssr3467 11 40451824 to 40451827 3 + TSS region transcription start site region 3467
D11Mit373 11 40462981 to 40463110 129 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-373
3110004A20Rik 11 40474718 to 40475677 959 - lincRNA gene RIKEN cDNA 3110004A20 gene
Gm12135 11 40505598 to 40506063 465 + pseudogene predicted gene 12135
Gm34281 11 40563827 to 40567314 3487 - lncRNA gene predicted gene, 34281
Gm12136 11 40569317 to 40570525 1208 - pseudogene predicted gene 12136
Tssr107473 11 40570538 to 40570541 3 - TSS region transcription start site region 107473
Gm12137 11 40612718 to 40613063 345 + pseudogene predicted gene 12137
Gm12138 11 40672906 to 40673856 950 - pseudogene predicted gene 12138
Tssr3468 11 40673889 to 40673898 9 - TSS region transcription start site region 3468
Mat2b 11 40679314 to 40695203 15889 - protein coding gene methionine adenosyltransferase II, beta
Tssr107474 11 40680158 to 40680168 10 - TSS region transcription start site region 107474
Tssr107475 11 40684963 to 40684967 4 - TSS region transcription start site region 107475
Cpgi2738 11 40692112 to 40692841 729 CpG island CpG island 2738
Tssr107476 11 40692579 to 40692664 85 - TSS region transcription start site region 107476
Tssr107477 11 40692666 to 40692679 13 - TSS region transcription start site region 107477
Tssr100960 11 40692774 to 40692802 28 + TSS region transcription start site region 100960
Cpgi2739 11 40694694 to 40695049 355 CpG island CpG island 2739
Tssr107478 11 40694838 to 40694849 11 - TSS region transcription start site region 107478
Tssr107479 11 40694867 to 40694923 56 - TSS region transcription start site region 107479
Tssr107480 11 40694928 to 40694948 20 - TSS region transcription start site region 107480
Tssr107481 11 40694950 to 40694983 33 - TSS region transcription start site region 107481
Tssr107482 11 40694989 to 40695041 52 - TSS region transcription start site region 107482
Tssr107483 11 40695206 to 40695223 17 - TSS region transcription start site region 107483
Hmmr 11 40701395 to 40733422 32027 - protein coding gene hyaluronan mediated motility receptor (RHAMM)