Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:39618464-40728643

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eae44 11 12318637 to 40060013 27741376 QTL experimental allergic encephalomyelitis susceptibility 44
Gm33963 11 39588168 to 39696513 108345 + lncRNA gene predicted gene, 33963
Gm12131 11 39727070 to 39727712 642 - pseudogene predicted gene 12131
Tssr107470 11 39767831 to 39767837 6 - TSS region transcription start site region 107470
Tssr107471 11 39794269 to 39794285 16 - TSS region transcription start site region 107471
Gm24192 11 39830656 to 39830800 144 + snRNA gene predicted gene, 24192
Gm12132 11 40008194 to 40337831 329637 + lincRNA gene predicted gene 12132
AI594671 11 40036224 to 40036391 167 unclassified gene expressed sequence AI594671
Eae44b 11 40059901 to 54203622 14143721 QTL experimental allergic encephalomyelitis susceptibility 44b
D11Mit307 11 40059901 to 40060013 112 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 307
D11Mit110 11 40173464 to 40173643 179 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 110
Tssr100958 11 40355384 to 40355393 9 + TSS region transcription start site region 100958
Tssr3466 11 40364696 to 40364701 5 + TSS region transcription start site region 3466
D11Mit218 11 40379825 to 40379968 143 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 218
Gm12133 11 40422693 to 40423254 561 - pseudogene predicted gene 12133
Gm34173 11 40425465 to 40429738 4273 - lncRNA gene predicted gene, 34173
Gm12134 11 40429537 to 40430056 519 + pseudogene predicted gene 12134
Tssr107472 11 40429745 to 40429748 3 - TSS region transcription start site region 107472
Tssr100959 11 40429842 to 40429844 2 + TSS region transcription start site region 100959
Tssr3467 11 40451824 to 40451827 3 + TSS region transcription start site region 3467
D11Mit373 11 40462981 to 40463110 129 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology-373
3110004A20Rik 11 40474718 to 40475677 959 - lincRNA gene RIKEN cDNA 3110004A20 gene
Gm12135 11 40505598 to 40506063 465 + pseudogene predicted gene 12135
Gm34281 11 40563827 to 40567314 3487 - lncRNA gene predicted gene, 34281
Gm12136 11 40569317 to 40570525 1208 - pseudogene predicted gene 12136
Tssr107473 11 40570538 to 40570541 3 - TSS region transcription start site region 107473
Gm12137 11 40612718 to 40613063 345 + pseudogene predicted gene 12137
Gm12138 11 40672906 to 40673856 950 - pseudogene predicted gene 12138
Tssr3468 11 40673889 to 40673898 9 - TSS region transcription start site region 3468
Mat2b 11 40679314 to 40695203 15889 - protein coding gene methionine adenosyltransferase II, beta
Tssr107474 11 40680158 to 40680168 10 - TSS region transcription start site region 107474
Tssr107475 11 40684963 to 40684967 4 - TSS region transcription start site region 107475
Cpgi2738 11 40692112 to 40692841 729 CpG island CpG island 2738
Tssr107476 11 40692579 to 40692664 85 - TSS region transcription start site region 107476
Tssr107477 11 40692666 to 40692679 13 - TSS region transcription start site region 107477
Tssr100960 11 40692774 to 40692802 28 + TSS region transcription start site region 100960
Cpgi2739 11 40694694 to 40695049 355 CpG island CpG island 2739
Tssr107478 11 40694838 to 40694849 11 - TSS region transcription start site region 107478
Tssr107479 11 40694867 to 40694923 56 - TSS region transcription start site region 107479
Tssr107480 11 40694928 to 40694948 20 - TSS region transcription start site region 107480
Tssr107481 11 40694950 to 40694983 33 - TSS region transcription start site region 107481
Tssr107482 11 40694989 to 40695041 52 - TSS region transcription start site region 107482
Tssr107483 11 40695206 to 40695223 17 - TSS region transcription start site region 107483
Hmmr 11 40701395 to 40733422 32027 - protein coding gene hyaluronan mediated motility receptor (RHAMM)