Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3938640-4028695

Filter by:
23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930556J24Rik 11 3937541 to 3976778 39237 - protein coding gene RIKEN cDNA 4930556J24 gene
Gm11953 11 3951714 to 3952716 1002 + pseudogene predicted gene 11953
Tssr100072 11 3963951 to 3963964 13 + TSS region transcription start site region 100072
Tssr100073 11 3963970 to 3963983 13 + TSS region transcription start site region 100073
Pes1 11 3963975 to 3980004 16029 + protein coding gene pescadillo ribosomal biogenesis factor 1
Cpgi2499 11 3963979 to 3964208 229 CpG island CpG island 2499
Tssr100074 11 3963987 to 3964021 34 + TSS region transcription start site region 100074
Tssr100075 11 3967732 to 3967735 3 + TSS region transcription start site region 100075
Tssr106527 11 3983308 to 3983318 10 - TSS region transcription start site region 106527
Cpgi2500 11 3983413 to 3984209 796 CpG island CpG island 2500
Gal3st1 11 3983636 to 3999326 15690 + protein coding gene galactose-3-O-sulfotransferase 1
Tssr100076 11 3983640 to 3983695 55 + TSS region transcription start site region 100076
Tssr100077 11 3983704 to 3983737 33 + TSS region transcription start site region 100077
Tssr100078 11 3983740 to 3983758 18 + TSS region transcription start site region 100078
Tssr106528 11 3983973 to 3983985 12 - TSS region transcription start site region 106528
Tssr106529 11 3983987 to 3983999 12 - TSS region transcription start site region 106529
Gm46265 11 3985165 to 3988759 3594 + lncRNA gene predicted gene, 46265
Tssr100079 11 3989924 to 3989946 22 + TSS region transcription start site region 100079
Tssr100080 11 3992489 to 3992524 35 + TSS region transcription start site region 100080
Cpgi2501 11 3997847 to 3999163 1316 CpG island CpG island 2501
Wght10 11 4000000 to 89000000 85000000 QTL weight 10
Lgth12 11 4000000 to 95000000 91000000 QTL body length 12
Gm11954 11 4002457 to 4002805 348 + pseudogene predicted gene 11954