Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3927541-3986778

24 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tcn2	11	3917192 to 3932159	14967	-	protein coding gene	transcobalamin 2
Tssr106521	11	3931505 to 3931544	39	-	TSS region	transcription start site region 106521
Tssr106522	11	3931545 to 3931570	25	-	TSS region	transcription start site region 106522
Tssr106523	11	3931588 to 3931599	11	-	TSS region	transcription start site region 106523
Tssr106524	11	3931791 to 3931816	25	-	TSS region	transcription start site region 106524
Tssr106525	11	3931976 to 3931981	5	-	TSS region	transcription start site region 106525
Tssr106526	11	3931998 to 3932083	85	-	TSS region	transcription start site region 106526
4930556J24Rik	11	3937541 to 3976778	39237	-	protein coding gene	RIKEN cDNA 4930556J24 gene
Gm11953	11	3951714 to 3952716	1002	+	pseudogene	predicted gene 11953
Tssr100072	11	3963951 to 3963964	13	+	TSS region	transcription start site region 100072
Tssr100073	11	3963970 to 3963983	13	+	TSS region	transcription start site region 100073
Pes1	11	3963975 to 3980004	16029	+	protein coding gene	pescadillo ribosomal biogenesis factor 1
Cpgi2499	11	3963979 to 3964208	229		CpG island	CpG island 2499
Tssr100074	11	3963987 to 3964021	34	+	TSS region	transcription start site region 100074
Tssr100075	11	3967732 to 3967735	3	+	TSS region	transcription start site region 100075
Tssr106527	11	3983308 to 3983318	10	-	TSS region	transcription start site region 106527
Cpgi2500	11	3983413 to 3984209	796		CpG island	CpG island 2500
Gal3st1	11	3983636 to 3999326	15690	+	protein coding gene	galactose-3-O-sulfotransferase 1
Tssr100076	11	3983640 to 3983695	55	+	TSS region	transcription start site region 100076
Tssr100077	11	3983704 to 3983737	33	+	TSS region	transcription start site region 100077
Tssr100078	11	3983740 to 3983758	18	+	TSS region	transcription start site region 100078
Tssr106528	11	3983973 to 3983985	12	-	TSS region	transcription start site region 106528
Tssr106529	11	3983987 to 3983999	12	-	TSS region	transcription start site region 106529
Gm46265	11	3985165 to 3988759	3594	+	lncRNA gene	predicted gene, 46265