Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3642791-3753326

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tug1 11 3639785 to 3648814 9029 - antisense lncRNA gene taurine upregulated gene 1
Gm27624 11 3644776 to 3644952 176 - unclassified non-coding RNA gene predicted gene, 27624
Gm27517 11 3645286 to 3645521 235 - unclassified non-coding RNA gene predicted gene, 27517
Gm27937 11 3646942 to 3647029 87 - unclassified non-coding RNA gene predicted gene, 27937
Gm27640 11 3647179 to 3647325 146 - unclassified non-coding RNA gene predicted gene, 27640
Tssr106496 11 3647471 to 3647508 37 - TSS region transcription start site region 106496
Tssr106497 11 3648071 to 3648099 28 - TSS region transcription start site region 106497
Cpgi2491 11 3648350 to 3649965 1615 CpG island CpG island 2491
Tssr106498 11 3648720 to 3648730 10 - TSS region transcription start site region 106498
Tssr106499 11 3648741 to 3648807 66 - TSS region transcription start site region 106499
Tssr100064 11 3648781 to 3648793 12 + TSS region transcription start site region 100064
Tssr106500 11 3648983 to 3649028 45 - TSS region transcription start site region 106500
Tssr106501 11 3649061 to 3649077 16 - TSS region transcription start site region 106501
Tssr100065 11 3649198 to 3649295 97 + TSS region transcription start site region 100065
Morc2a 11 3649494 to 3690477 40983 + protein coding gene microrchidia 2A
Tssr100066 11 3655693 to 3655712 19 + TSS region transcription start site region 100066
Gm26393 11 3656663 to 3656791 128 - snRNA gene predicted gene, 26393
Gm16518 11 3697791 to 3698326 535 - pseudogene predicted gene, 16518
Osbp2 11 3703731 to 3863903 160172 - protein coding gene oxysterol binding protein 2
Cpgi2492 11 3705300 to 3705724 424 CpG island CpG island 2492
Cpgi2493 11 3714535 to 3714725 190 CpG island CpG island 2493
Tssr106502 11 3722160 to 3722184 24 - TSS region transcription start site region 106502
Tssr106503 11 3722189 to 3722222 33 - TSS region transcription start site region 106503