Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:35949061-36389065

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wwc1 11 35839178 to 35980089 140911 - protein coding gene WW, C2 and coiled-coil domain containing 1
Cpgi2732 11 35979673 to 35980904 1231 CpG island CpG island 2732
Tssr107418 11 35980442 to 35980456 14 - TSS region transcription start site region 107418
Tssr107419 11 35980473 to 35980579 106 - TSS region transcription start site region 107419
Tssr107420 11 35980591 to 35980608 17 - TSS region transcription start site region 107420
Cpgi2733 11 35985896 to 35986117 221 CpG island CpG island 2733
Gm12125 11 35996054 to 35996789 735 + pseudogene predicted gene 12125
Gm42072 11 35997854 to 36016418 18564 + lncRNA gene predicted gene, 42072
Bmiq10 11 36000000 to 85000000 49000000 QTL body mass index QTL 10
Cpgi2734 11 36001288 to 36001885 597 CpG island CpG island 2734
Tenm2 11 36006656 to 37235964 1229308 - protein coding gene teneurin transmembrane protein 2
Tssr107421 11 36007712 to 36007726 14 - TSS region transcription start site region 107421
Tssr107422 11 36007861 to 36007873 12 - TSS region transcription start site region 107422
Cpgi2735 11 36008100 to 36008603 503 CpG island CpG island 2735
D11Mit108 11 36041780 to 36041929 149 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 108
Tssr3464 11 36053020 to 36053021 1 + TSS region transcription start site region 3464
Gm12126 11 36080664 to 36083854 3190 + antisense lncRNA gene predicted gene 12126
Gm42071 11 36103561 to 36106062 2501 + lncRNA gene predicted gene, 42071
Tssr107423 11 36169061 to 36169065 4 - TSS region transcription start site region 107423
Gm46251 11 36169605 to 36177302 7697 + lncRNA gene predicted gene, 46251
Tssr107424 11 36181450 to 36181455 5 - TSS region transcription start site region 107424
Tssr107425 11 36271867 to 36271869 2 - TSS region transcription start site region 107425
Gm12127 11 36278041 to 36279987 1946 + antisense lncRNA gene predicted gene 12127
Tssr107426 11 36307423 to 36307426 3 - TSS region transcription start site region 107426
D11Mit233 11 36325454 to 36325573 119 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 233
Tssr100954 11 36338614 to 36338636 22 + TSS region transcription start site region 100954
Gm33585 11 36356737 to 36428795 72058 + lncRNA gene predicted gene, 33585
Tssr3465 11 36371951 to 36371952 1 + TSS region transcription start site region 3465