MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:35701253-35801501

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Slit3	11	35121456 to 35708507	587051	+	protein coding gene	slit guidance ligand 3
Tssr100942	11	35707703 to 35707722	19	+	TSS region	transcription start site region 100942
Cpgi2726	11	35707915 to 35708173	258		CpG island	CpG island 2726
Cpgi2727	11	35751253 to 35751501	248		CpG island	CpG island 2727
Tssr100943	11	35768794 to 35768798	4	+	TSS region	transcription start site region 100943
Cpgi2728	11	35769194 to 35770252	1058		CpG island	CpG island 2728
Tssr100944	11	35769374 to 35769404	30	+	TSS region	transcription start site region 100944
Tssr100945	11	35769462 to 35769475	13	+	TSS region	transcription start site region 100945
Pank3	11	35769495 to 35791285	21790	+	protein coding gene	pantothenate kinase 3
Tssr100946	11	35769574 to 35769616	42	+	TSS region	transcription start site region 100946
Tssr100947	11	35769621 to 35769652	31	+	TSS region	transcription start site region 100947
Tssr100948	11	35769807 to 35769819	12	+	TSS region	transcription start site region 100948
Tssr100949	11	35769820 to 35769869	49	+	TSS region	transcription start site region 100949
Mir103-1	11	35782396 to 35782481	85	+	miRNA gene	microRNA 103-1
Tssr100950	11	35784072 to 35784075	3	+	TSS region	transcription start site region 100950
Gm12124	11	35792781 to 35793459	678	+	pseudogene	predicted gene 12124
Fbll1	11	35797382 to 35798884	1502	-	protein coding gene	fibrillarin-like 1
Cpgi2729	11	35797417 to 35798829	1412		CpG island	CpG island 2729
Tssr107403	11	35798536 to 35798612	76	-	TSS region	transcription start site region 107403