Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:35551420-35778232

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slit3 11 35121456 to 35708507 587051 + protein coding gene slit guidance ligand 3
Tssr100941 11 35558755 to 35558756 1 + TSS region transcription start site region 100941
Mir218-2 11 35616816 to 35616925 109 + miRNA gene microRNA 218-2
Gm46278 11 35651420 to 35678232 26812 - lncRNA gene predicted gene, 46278
D11Mit231.2 11 35687641 to 35687792 151 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 231.2
Char8 11 35687789 to 69794161 34106372 QTL P. chabaudi malaria resistance QTL 8
Pbw3 11 35687789 to 44175104 8487315 QTL pentobarbital withdrawal QTL 3
Bulb3 11 35687789 to 35687889 100 QTL bulb size 3
D11Mit231 11 35687789 to 35687889 100 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 231
Intim2 11 35687789 to 35687889 100 QTL intima modifier 2
Alcw9 11 35687789 to 44175104 8487315 QTL alcohol withdrawal 9
D11Dcr6 11 35687789 to 35687889 100 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 6
Leuf1 11 35687789 to 35687889 100 QTL leukocyte filtration 1
Zolw1 11 35687789 to 44175104 8487315 QTL zolpidem withdrawal 1
Intmrm2 11 35687789 to 35687889 100 QTL intima/media ratio modifier 2
Tssr100942 11 35707703 to 35707722 19 + TSS region transcription start site region 100942
Cpgi2726 11 35707915 to 35708173 258 CpG island CpG island 2726
Cpgi2727 11 35751253 to 35751501 248 CpG island CpG island 2727
Tssr100943 11 35768794 to 35768798 4 + TSS region transcription start site region 100943
Cpgi2728 11 35769194 to 35770252 1058 CpG island CpG island 2728
Tssr100944 11 35769374 to 35769404 30 + TSS region transcription start site region 100944
Tssr100945 11 35769462 to 35769475 13 + TSS region transcription start site region 100945
Pank3 11 35769495 to 35791285 21790 + protein coding gene pantothenate kinase 3
Tssr100946 11 35769574 to 35769616 42 + TSS region transcription start site region 100946
Tssr100947 11 35769621 to 35769652 31 + TSS region transcription start site region 100947
Tssr100948 11 35769807 to 35769819 12 + TSS region transcription start site region 100948
Tssr100949 11 35769820 to 35769869 49 + TSS region transcription start site region 100949