Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3540300-3870724

Filter by:
46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33983 11 3539646 to 3546275 6629 + lncRNA gene predicted gene, 33983
Cpgi2489 11 3540518 to 3540708 190 CpG island CpG island 2489
Gm34488 11 3556610 to 3566209 9599 - lncRNA gene predicted gene, 34488
Gm39567 11 3569853 to 3573238 3385 - lncRNA gene predicted gene, 39567
D11Mit1.1 11 3573449 to 3573580 131 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1.1
D11Mit1 11 3573582 to 3573735 153 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 1
Gm11949 11 3625477 to 3625848 371 - pseudogene predicted gene 11949
Cpgi2490 11 3628811 to 3629565 754 CpG island CpG island 2490
Gm11950 11 3628824 to 3629661 837 + pseudogene predicted gene 11950
Gm11951 11 3633012 to 3633442 430 - pseudogene predicted gene 11951
Tssr106495 11 3633461 to 3633506 45 - TSS region transcription start site region 106495
Tug1 11 3639785 to 3648814 9029 - antisense lncRNA gene taurine upregulated gene 1
Gm27624 11 3644776 to 3644952 176 - unclassified non-coding RNA gene predicted gene, 27624
Gm27517 11 3645286 to 3645521 235 - unclassified non-coding RNA gene predicted gene, 27517
Gm27937 11 3646942 to 3647029 87 - unclassified non-coding RNA gene predicted gene, 27937
Gm27640 11 3647179 to 3647325 146 - unclassified non-coding RNA gene predicted gene, 27640
Tssr106496 11 3647471 to 3647508 37 - TSS region transcription start site region 106496
Tssr106497 11 3648071 to 3648099 28 - TSS region transcription start site region 106497
Cpgi2491 11 3648350 to 3649965 1615 CpG island CpG island 2491
Tssr106498 11 3648720 to 3648730 10 - TSS region transcription start site region 106498
Tssr106499 11 3648741 to 3648807 66 - TSS region transcription start site region 106499
Tssr100064 11 3648781 to 3648793 12 + TSS region transcription start site region 100064
Tssr106500 11 3648983 to 3649028 45 - TSS region transcription start site region 106500
Tssr106501 11 3649061 to 3649077 16 - TSS region transcription start site region 106501
Tssr100065 11 3649198 to 3649295 97 + TSS region transcription start site region 100065
Morc2a 11 3649494 to 3690477 40983 + protein coding gene microrchidia 2A
Tssr100066 11 3655693 to 3655712 19 + TSS region transcription start site region 100066
Gm26393 11 3656663 to 3656791 128 - snRNA gene predicted gene, 26393
Gm16518 11 3697791 to 3698326 535 - pseudogene predicted gene, 16518
Osbp2 11 3703731 to 3863903 160172 - protein coding gene oxysterol binding protein 2
Cpgi2492 11 3705300 to 3705724 424 CpG island CpG island 2492
Cpgi2493 11 3714535 to 3714725 190 CpG island CpG island 2493
Tssr106502 11 3722160 to 3722184 24 - TSS region transcription start site region 106502
Tssr106503 11 3722189 to 3722222 33 - TSS region transcription start site region 106503
Cpgi2494 11 3761381 to 3762673 1292 CpG island CpG island 2494
Cpgi2495 11 3774195 to 3775166 971 CpG island CpG island 2495
Tssr106504 11 3774694 to 3774702 8 - TSS region transcription start site region 106504
Tssr106505 11 3774706 to 3774738 32 - TSS region transcription start site region 106505
Tssr106506 11 3775133 to 3775162 29 - TSS region transcription start site region 106506
Gm24013 11 3788892 to 3788990 98 + snoRNA gene predicted gene, 24013
Tssr106507 11 3805210 to 3805252 42 - TSS region transcription start site region 106507
Tssr100067 11 3839982 to 3840007 25 + TSS region transcription start site region 100067
Cpgi2496 11 3863165 to 3864417 1252 CpG island CpG island 2496
Tssr106508 11 3863716 to 3863727 11 - TSS region transcription start site region 106508
Tssr106509 11 3863869 to 3863886 17 - TSS region transcription start site region 106509
Tssr106510 11 3863895 to 3863910 15 - TSS region transcription start site region 106510