Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3501055-3531073

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Inpp5j 11 3494375 to 3504821 10446 - protein coding gene inositol polyphosphate 5-phosphatase J
Cpgi2481 11 3502157 to 3502529 372 CpG island CpG island 2481
Tssr106477 11 3502636 to 3502667 31 - TSS region transcription start site region 106477
Tssr106478 11 3503001 to 3503017 16 - TSS region transcription start site region 106478
Tssr106479 11 3504747 to 3504762 15 - TSS region transcription start site region 106479
Tssr106480 11 3504766 to 3504833 67 - TSS region transcription start site region 106480
Tssr106481 11 3504993 to 3505003 10 - TSS region transcription start site region 106481
Tssr106482 11 3505462 to 3505471 9 - TSS region transcription start site region 106482
Tssr106483 11 3509224 to 3509227 3 - TSS region transcription start site region 106483
Cpgi2482 11 3514600 to 3515125 525 CpG island CpG island 2482
Selenom 11 3514702 to 3517351 2649 + protein coding gene selenoprotein M
Tssr100056 11 3514861 to 3514894 33 + TSS region transcription start site region 100056
Tssr100057 11 3514897 to 3514928 31 + TSS region transcription start site region 100057
Tssr100058 11 3514930 to 3514952 22 + TSS region transcription start site region 100058
Tssr3409 11 3516055 to 3516073 18 + TSS region transcription start site region 3409
Tssr100059 11 3516829 to 3516876 47 + TSS region transcription start site region 100059
Cpgi2483 11 3516967 to 3517181 214 CpG island CpG island 2483
Cpgi2484 11 3517473 to 3517932 459 CpG island CpG island 2484
Smtn 11 3517522 to 3539654 22132 - protein coding gene smoothelin
Cpgi2485 11 3521029 to 3521226 197 CpG island CpG island 2485
Cpgi2486 11 3521641 to 3521807 166 CpG island CpG island 2486
Tssr106484 11 3526451 to 3526477 26 - TSS region transcription start site region 106484
Tssr106485 11 3527916 to 3527959 43 - TSS region transcription start site region 106485
Tssr106486 11 3529556 to 3529592 36 - TSS region transcription start site region 106486
Tssr106487 11 3529880 to 3529889 9 - TSS region transcription start site region 106487
Tssr106488 11 3529907 to 3529925 18 - TSS region transcription start site region 106488
Tssr3410 11 3529999 to 3530009 10 + TSS region transcription start site region 3410
Tssr106489 11 3530015 to 3530040 25 - TSS region transcription start site region 106489
Tssr106490 11 3530046 to 3530065 19 - TSS region transcription start site region 106490
Tssr100060 11 3530228 to 3530239 11 + TSS region transcription start site region 100060
Gm11946 11 3530364 to 3536858 6494 + lncRNA gene predicted gene 11946
Tssr100061 11 3530908 to 3530927 19 + TSS region transcription start site region 100061
Tssr100062 11 3530932 to 3530959 27 + TSS region transcription start site region 100062