Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:34740729-35730853

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnbs2 11 24948052 to 35235853 10287801 QTL tri-nitrobenzene sulfonic acid susceptible 2
Dock2 11 34226815 to 34783892 557077 - protein coding gene dedicator of cyto-kinesis 2
Tssr107393 11 34744657 to 34744686 29 - TSS region transcription start site region 107393
Tssr107394 11 34770688 to 34770722 34 - TSS region transcription start site region 107394
Tssr107395 11 34771423 to 34771435 12 - TSS region transcription start site region 107395
Tssr107396 11 34783122 to 34783135 13 - TSS region transcription start site region 107396
Tssr100927 11 34783254 to 34783291 37 + TSS region transcription start site region 100927
Tssr107397 11 34783850 to 34783900 50 - TSS region transcription start site region 107397
Tssr100928 11 34783957 to 34783990 33 + TSS region transcription start site region 100928
Spdl1 11 34809190 to 34833641 24451 - protein coding gene spindle apparatus coiled-coil protein 1
Tssr100929 11 34827206 to 34827215 9 + TSS region transcription start site region 100929
Cpgi2724 11 34833214 to 34834015 801 CpG island CpG island 2724
Tssr107398 11 34833584 to 34833596 12 - TSS region transcription start site region 107398
Tssr107399 11 34833603 to 34833626 23 - TSS region transcription start site region 107399
Tssr107400 11 34833631 to 34833663 32 - TSS region transcription start site region 107400
Tssr100930 11 34833719 to 34833772 53 + TSS region transcription start site region 100930
Tssr100931 11 34833786 to 34833791 5 + TSS region transcription start site region 100931
Tssr107401 11 34839116 to 34839125 9 - TSS region transcription start site region 107401
Tssr100932 11 34839416 to 34839420 4 + TSS region transcription start site region 100932
Gm22022 11 34842228 to 34842354 126 - snoRNA gene predicted gene, 22022
D11Dcr5 11 34866601 to 34866697 96 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 5
Tssr107402 11 34871542 to 34871545 3 - TSS region transcription start site region 107402
Gm12711 11 34880339 to 34882531 2192 + lincRNA gene predicted gene 12711
Gm25799 11 34899017 to 34899123 106 + snRNA gene predicted gene, 25799
Gm33277 11 34938945 to 34941727 2782 - lncRNA gene predicted gene, 33277
Tssr100933 11 35078563 to 35078572 9 + TSS region transcription start site region 100933
Cpgi2725 11 35120919 to 35122157 1238 CpG island CpG island 2725
Tssr100934 11 35121065 to 35121118 53 + TSS region transcription start site region 100934
Tssr100935 11 35121126 to 35121141 15 + TSS region transcription start site region 100935
Tssr100936 11 35121397 to 35121512 115 + TSS region transcription start site region 100936
Slit3 11 35121456 to 35708507 587051 + protein coding gene slit guidance ligand 3
Gm26070 11 35214401 to 35214537 136 + snoRNA gene predicted gene, 26070
Gm33453 11 35216736 to 35226550 9814 - lncRNA gene predicted gene, 33453
D11Mit186 11 35235729 to 35235853 124 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 186
Gm46277 11 35287973 to 35328034 40061 + lncRNA gene predicted gene, 46277
Gm12123 11 35323199 to 35323670 471 - pseudogene predicted gene 12123
Gm12122 11 35350069 to 35350785 716 + sense intronic lncRNA gene predicted gene 12122
Tssr100937 11 35459531 to 35459535 4 + TSS region transcription start site region 100937
Gm39705 11 35539778 to 35544722 4944 - lncRNA gene predicted gene, 39705
Tssr100938 11 35544484 to 35544495 11 + TSS region transcription start site region 100938
Tssr100939 11 35544504 to 35544520 16 + TSS region transcription start site region 100939
Tssr100940 11 35544522 to 35544565 43 + TSS region transcription start site region 100940
Tssr100941 11 35558755 to 35558756 1 + TSS region transcription start site region 100941
Mir218-2 11 35616816 to 35616925 109 + miRNA gene microRNA 218-2
Gm46278 11 35651420 to 35678232 26812 - lncRNA gene predicted gene, 46278
D11Mit231.2 11 35687641 to 35687792 151 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 231.2
Alcw9 11 35687789 to 44175104 8487315 QTL alcohol withdrawal 9
Bulb3 11 35687789 to 35687889 100 QTL bulb size 3
Char8 11 35687789 to 69794161 34106372 QTL P. chabaudi malaria resistance QTL 8
D11Dcr6 11 35687789 to 35687889 100 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 6
D11Mit231 11 35687789 to 35687889 100 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 231
Intim2 11 35687789 to 35687889 100 QTL intima modifier 2
Intmrm2 11 35687789 to 35687889 100 QTL intima/media ratio modifier 2
Leuf1 11 35687789 to 35687889 100 QTL leukocyte filtration 1
Pbw3 11 35687789 to 44175104 8487315 QTL pentobarbital withdrawal QTL 3
Zolw1 11 35687789 to 44175104 8487315 QTL zolpidem withdrawal 1
Tssr100942 11 35707703 to 35707722 19 + TSS region transcription start site region 100942
Cpgi2726 11 35707915 to 35708173 258 CpG island CpG island 2726