MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:3468208-3508232

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
8430429K09Rik	11	3452437 to 3479831	27394	+	lncRNA gene	RIKEN cDNA 8430429K09 gene
Gm11945	11	3470902 to 3471377	475	-	pseudogene	predicted gene 11945
Tssr106475	11	3471496 to 3471522	26	-	TSS region	transcription start site region 106475
Gm24439	11	3474285 to 3474401	116	-	snoRNA gene	predicted gene, 24439
D630033L23Rik	11	3476358 to 3477243	885		unclassified gene	RIKEN cDNA D630033L23 gene
Tssr100053	11	3488208 to 3488232	24	+	TSS region	transcription start site region 100053
Tssr100054	11	3488275 to 3488287	12	+	TSS region	transcription start site region 100054
Pla2g3	11	3488284 to 3499350	11066	+	protein coding gene	phospholipase A2, group III
Tssr100055	11	3488292 to 3488304	12	+	TSS region	transcription start site region 100055
Inpp5j	11	3494375 to 3504821	10446	-	protein coding gene	inositol polyphosphate 5-phosphatase J
Tssr106476	11	3497423 to 3497435	12	-	TSS region	transcription start site region 106476
Cpgi2481	11	3502157 to 3502529	372		CpG island	CpG island 2481
Tssr106477	11	3502636 to 3502667	31	-	TSS region	transcription start site region 106477
Tssr106478	11	3503001 to 3503017	16	-	TSS region	transcription start site region 106478
Tssr106479	11	3504747 to 3504762	15	-	TSS region	transcription start site region 106479
Tssr106480	11	3504766 to 3504833	67	-	TSS region	transcription start site region 106480
Tssr106481	11	3504993 to 3505003	10	-	TSS region	transcription start site region 106481
Tssr106482	11	3505462 to 3505471	9	-	TSS region	transcription start site region 106482