Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:34473214-35194015

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dock2 11 34226815 to 34783892 557077 - protein coding gene dedicator of cyto-kinesis 2
Tssr107377 11 34477890 to 34477902 12 - TSS region transcription start site region 107377
Tssr107378 11 34497162 to 34497173 11 - TSS region transcription start site region 107378
Gm29887 11 34506366 to 34514259 7893 + lncRNA gene predicted gene, 29887
Tssr100926 11 34506974 to 34506984 10 + TSS region transcription start site region 100926
Tssr3461 11 34507077 to 34507083 6 + TSS region transcription start site region 3461
Gm39681 11 34514570 to 34515180 610 + lncRNA gene predicted gene, 39681
D11Mit84 11 34533052 to 34533182 130 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 84
4933402E15Rik 11 34535637 to 34537001 1364 unclassified gene RIKEN cDNA 4933402E15 gene
Tssr107379 11 34543987 to 34544001 14 - TSS region transcription start site region 107379
Tssr107380 11 34544845 to 34544903 58 - TSS region transcription start site region 107380
Tssr107381 11 34681693 to 34681712 19 - TSS region transcription start site region 107381
Tssr107382 11 34681735 to 34681762 27 - TSS region transcription start site region 107382
Tssr107383 11 34681830 to 34681883 53 - TSS region transcription start site region 107383
Tssr107384 11 34681907 to 34681955 48 - TSS region transcription start site region 107384
Tssr107385 11 34682074 to 34682097 23 - TSS region transcription start site region 107385
Tssr107386 11 34682114 to 34682172 58 - TSS region transcription start site region 107386
Tssr107387 11 34682226 to 34682251 25 - TSS region transcription start site region 107387
Tssr107388 11 34683732 to 34683743 11 - TSS region transcription start site region 107388
Tssr107389 11 34696219 to 34696233 14 - TSS region transcription start site region 107389
Tssr107390 11 34711925 to 34711937 12 - TSS region transcription start site region 107390
Tssr107391 11 34718950 to 34718985 35 - TSS region transcription start site region 107391
Tssr107392 11 34737822 to 34737829 7 - TSS region transcription start site region 107392
Tssr107393 11 34744657 to 34744686 29 - TSS region transcription start site region 107393
Tssr107394 11 34770688 to 34770722 34 - TSS region transcription start site region 107394
Tssr107395 11 34771423 to 34771435 12 - TSS region transcription start site region 107395
Tssr107396 11 34783122 to 34783135 13 - TSS region transcription start site region 107396
Tssr100927 11 34783254 to 34783291 37 + TSS region transcription start site region 100927
Tssr107397 11 34783850 to 34783900 50 - TSS region transcription start site region 107397
Tssr100928 11 34783957 to 34783990 33 + TSS region transcription start site region 100928
Spdl1 11 34809190 to 34833641 24451 - protein coding gene spindle apparatus coiled-coil protein 1
Tssr100929 11 34827206 to 34827215 9 + TSS region transcription start site region 100929
Cpgi2724 11 34833214 to 34834015 801 CpG island CpG island 2724
Tssr107398 11 34833584 to 34833596 12 - TSS region transcription start site region 107398
Tssr107399 11 34833603 to 34833626 23 - TSS region transcription start site region 107399
Tssr107400 11 34833631 to 34833663 32 - TSS region transcription start site region 107400
Tssr100930 11 34833719 to 34833772 53 + TSS region transcription start site region 100930
Tssr100931 11 34833786 to 34833791 5 + TSS region transcription start site region 100931
Tssr107401 11 34839116 to 34839125 9 - TSS region transcription start site region 107401
Tssr100932 11 34839416 to 34839420 4 + TSS region transcription start site region 100932
Gm22022 11 34842228 to 34842354 126 - snoRNA gene predicted gene, 22022
D11Dcr5 11 34866601 to 34866697 96 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 5
Tssr107402 11 34871542 to 34871545 3 - TSS region transcription start site region 107402
Gm12711 11 34880339 to 34882531 2192 + lincRNA gene predicted gene 12711
Gm25799 11 34899017 to 34899123 106 + snRNA gene predicted gene, 25799
Gm33277 11 34938945 to 34941727 2782 - lncRNA gene predicted gene, 33277
Tssr100933 11 35078563 to 35078572 9 + TSS region transcription start site region 100933
Cpgi2725 11 35120919 to 35122157 1238 CpG island CpG island 2725
Tssr100934 11 35121065 to 35121118 53 + TSS region transcription start site region 100934
Tssr100935 11 35121126 to 35121141 15 + TSS region transcription start site region 100935
Tssr100936 11 35121397 to 35121512 115 + TSS region transcription start site region 100936
Slit3 11 35121456 to 35708507 587051 + protein coding gene slit guidance ligand 3