Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:34199822-34537640

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxi1 11 34204341 to 34208089 3748 - protein coding gene forkhead box I1
Tssr107360 11 34207562 to 34207572 10 - TSS region transcription start site region 107360
Cpgi2723 11 34207576 to 34208035 459 CpG island CpG island 2723
Tssr107361 11 34207586 to 34207593 7 - TSS region transcription start site region 107361
Tssr107362 11 34208085 to 34208092 7 - TSS region transcription start site region 107362
Dock2 11 34226815 to 34783892 557077 - protein coding gene dedicator of cyto-kinesis 2
Tssr107363 11 34227268 to 34227279 11 - TSS region transcription start site region 107363
Tssr107364 11 34227353 to 34227380 27 - TSS region transcription start site region 107364
Tssr107365 11 34227547 to 34227565 18 - TSS region transcription start site region 107365
Tssr107366 11 34228691 to 34228711 20 - TSS region transcription start site region 107366
Tssr100922 11 34299695 to 34299701 6 + TSS region transcription start site region 100922
Tssr100923 11 34299706 to 34299720 14 + TSS region transcription start site region 100923
4930403D09Rik 11 34299707 to 34308113 8406 + antisense lncRNA gene RIKEN cDNA 4930403D09 gene
Tssr100924 11 34299736 to 34299755 19 + TSS region transcription start site region 100924
Tssr107367 11 34311739 to 34311757 18 - TSS region transcription start site region 107367
Tssr107368 11 34311793 to 34311811 18 - TSS region transcription start site region 107368
Tssr107369 11 34313856 to 34313868 12 - TSS region transcription start site region 107369
Tssr100925 11 34314757 to 34314786 29 + TSS region transcription start site region 100925
Insyn2b 11 34314822 to 34422640 107818 + protein coding gene inhibitory synaptic factor family member 2B
Tssr107370 11 34317775 to 34317780 5 - TSS region transcription start site region 107370
Tssr107371 11 34361059 to 34361075 16 - TSS region transcription start site region 107371
Tssr107372 11 34365874 to 34365886 12 - TSS region transcription start site region 107372
Tssr107373 11 34393900 to 34393935 35 - TSS region transcription start site region 107373
Tssr107374 11 34406974 to 34406986 12 - TSS region transcription start site region 107374
Tssr107375 11 34407065 to 34407078 13 - TSS region transcription start site region 107375
Tssr107376 11 34407121 to 34407135 14 - TSS region transcription start site region 107376
Tssr107377 11 34477890 to 34477902 12 - TSS region transcription start site region 107377
Tssr107378 11 34497162 to 34497173 11 - TSS region transcription start site region 107378
Gm29887 11 34506366 to 34514259 7893 + lncRNA gene predicted gene, 29887
Tssr100926 11 34506974 to 34506984 10 + TSS region transcription start site region 100926
Tssr3461 11 34507077 to 34507083 6 + TSS region transcription start site region 3461
Gm39681 11 34514570 to 34515180 610 + lncRNA gene predicted gene, 39681
D11Mit84 11 34533052 to 34533182 130 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 84
4933402E15Rik 11 34535637 to 34537001 1364 unclassified gene RIKEN cDNA 4933402E15 gene