Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:33866086-34066219

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kcnip1 11 33629339 to 33993152 363813 - protein coding gene Kv channel-interacting protein 1
Gm39679 11 33857280 to 33871278 13998 + lncRNA gene predicted gene, 39679
Tssr100884 11 33872445 to 33872451 6 + TSS region transcription start site region 100884
Tssr107351 11 33880120 to 33880123 3 - TSS region transcription start site region 107351
Gm39678 11 33889170 to 33895850 6680 - lncRNA gene predicted gene, 39678
Gm39677 11 33891046 to 33894473 3427 + lncRNA gene predicted gene, 39677
Tssr3460 11 33915377 to 33915378 1 - TSS region transcription start site region 3460
Tssr107352 11 33933013 to 33933018 5 - TSS region transcription start site region 107352
Gm36395 11 33933632 to 33937955 4323 + lncRNA gene predicted gene, 36395
Tssr100885 11 33940208 to 33940251 43 + TSS region transcription start site region 100885
Tssr100886 11 33940265 to 33940276 11 + TSS region transcription start site region 100886
Kcnmb1 11 33963013 to 33973641 10628 + protein coding gene potassium large conductance calcium-activated channel, subfamily M, beta member 1
Tssr100887 11 33963206 to 33963243 37 + TSS region transcription start site region 100887
Tssr100888 11 33963281 to 33963297 16 + TSS region transcription start site region 100888
D11Mit173 11 33966086 to 33966219 133 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 173
Tgyl1 11 33966219 to 6930277 -27035942 QTL triglyceride level 1
Tssr107353 11 33992981 to 33993009 28 - TSS region transcription start site region 107353
Tssr107354 11 33993146 to 33993159 13 - TSS region transcription start site region 107354
Tssr107355 11 34008910 to 34008919 9 - TSS region transcription start site region 107355
Tssr100889 11 34009399 to 34009439 40 + TSS region transcription start site region 100889
Tssr100890 11 34023079 to 34023085 6 + TSS region transcription start site region 100890
Tssr100891 11 34046922 to 34046958 36 + TSS region transcription start site region 100891
Tssr100892 11 34047078 to 34047093 15 + TSS region transcription start site region 100892
Tssr100893 11 34047115 to 34047242 127 + TSS region transcription start site region 100893
Lcp2 11 34047201 to 34092280 45079 + protein coding gene lymphocyte cytosolic protein 2
Tssr100894 11 34047243 to 34047257 14 + TSS region transcription start site region 100894
Tssr100895 11 34047290 to 34047299 9 + TSS region transcription start site region 100895
Tssr100896 11 34047321 to 34047326 5 + TSS region transcription start site region 100896
Tssr100897 11 34047646 to 34047657 11 + TSS region transcription start site region 100897
Tssr100898 11 34048831 to 34048835 4 + TSS region transcription start site region 100898
Tssr100899 11 34048971 to 34048984 13 + TSS region transcription start site region 100899
Tssr100900 11 34054289 to 34054311 22 + TSS region transcription start site region 100900