Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:33201795-33523746

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2716 11 33200104 to 33201932 1828 CpG island CpG island 2716
Tlx3 11 33200752 to 33203588 2836 - protein coding gene T cell leukemia, homeobox 3
Cpgi2717 11 33202181 to 33204809 2628 CpG island CpG island 2717
Tssr107325 11 33203551 to 33203561 10 - TSS region transcription start site region 107325
Tssr107326 11 33203563 to 33203583 20 - TSS region transcription start site region 107326
Tssr107327 11 33203589 to 33203599 10 - TSS region transcription start site region 107327
Tssr107328 11 33203600 to 33203611 11 - TSS region transcription start site region 107328
Tssr100878 11 33203730 to 33203741 11 + TSS region transcription start site region 100878
Gm12116 11 33204055 to 33221477 17422 + lincRNA gene predicted gene 12116
Ranbp17 11 33211795 to 33513746 301951 - protein coding gene RAN binding protein 17
Gm12117 11 33275758 to 33276737 979 - pseudogene predicted gene 12117
D11Ertd506e 11 33322603 to 33322848 245 DNA segment DNA segment, Chr 11, ERATO Doi 506, expressed
Anp32-ps 11 33394879 to 33395266 387 - pseudogene acidic (leucine-rich) nuclear phosphoprotein 32 family, pseudogene
Gm9450 11 33427885 to 33428470 585 - pseudogene predicted gene 9450
Gm12118 11 33438449 to 33438980 531 + pseudogene predicted gene 12118
D11Mit345 11 33507301 to 33507625 324 DNA segment DNA Segment, Chr 11, Massachusetts Institute of Technology 345
Cpgi2718 11 33512883 to 33514200 1317 CpG island CpG island 2718
Tssr100879 11 33513031 to 33513055 24 + TSS region transcription start site region 100879
Tssr100880 11 33513062 to 33513083 21 + TSS region transcription start site region 100880
1700072H12Rik 11 33513120 to 33514458 1338 unclassified gene RIKEN cDNA 1700072H12 gene
Tssr107329 11 33513626 to 33513666 40 - TSS region transcription start site region 107329
Tssr107330 11 33513671 to 33513682 11 - TSS region transcription start site region 107330
Tssr107331 11 33513722 to 33513733 11 - TSS region transcription start site region 107331
Tssr107332 11 33513736 to 33513771 35 - TSS region transcription start site region 107332