Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3291032-3331059

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2476 11 3288482 to 3291899 3417 CpG island CpG island 2476
Patz1 11 3289131 to 3309083 19952 + protein coding gene POZ (BTB) and AT hook containing zinc finger 1
Tssr100027 11 3291327 to 3291371 44 + TSS region transcription start site region 100027
Tssr106457 11 3291609 to 3291630 21 - TSS region transcription start site region 106457
Tssr106458 11 3291642 to 3291662 20 - TSS region transcription start site region 106458
Tssr100028 11 3291738 to 3291766 28 + TSS region transcription start site region 100028
Tssr100029 11 3291829 to 3291848 19 + TSS region transcription start site region 100029
Tssr100030 11 3292286 to 3292340 54 + TSS region transcription start site region 100030
Tssr100031 11 3292443 to 3292452 9 + TSS region transcription start site region 100031
Tssr100032 11 3292938 to 3292962 24 + TSS region transcription start site region 100032
Tssr100033 11 3293109 to 3293128 19 + TSS region transcription start site region 100033
Tssr100034 11 3293138 to 3293160 22 + TSS region transcription start site region 100034
Tssr100035 11 3293228 to 3293245 17 + TSS region transcription start site region 100035
Tssr100036 11 3293276 to 3293288 12 + TSS region transcription start site region 100036
9630045H20Rik 11 3300667 to 3304464 3797 unclassified gene RIKEN cDNA 9630045H20 gene
Gm12592 11 3305426 to 3331178 25752 - unclassified non-coding RNA gene predicted gene 12592
Gm11944 11 3309000 to 3320722 11722 + lncRNA gene predicted gene 11944
Tssr100037 11 3310056 to 3310061 5 + TSS region transcription start site region 100037
Tssr100038 11 3311032 to 3311059 27 + TSS region transcription start site region 100038
D11Dcr1 11 3315493 to 3315591 98 DNA segment DNA Segment, Chr 11, Derry C. Roopenian 1
Pik3ip1 11 3330401 to 3342971 12570 + protein coding gene phosphoinositide-3-kinase interacting protein 1
Tssr100039 11 3330521 to 3330541 20 + TSS region transcription start site region 100039
Tssr100040 11 3330668 to 3330694 26 + TSS region transcription start site region 100040
Tssr100041 11 3330740 to 3330749 9 + TSS region transcription start site region 100041
Tssr3405 11 3330754 to 3330759 5 + TSS region transcription start site region 3405
Tssr100042 11 3330777 to 3330780 3 + TSS region transcription start site region 100042
Tssr100043 11 3330781 to 3330812 31 + TSS region transcription start site region 100043
Tssr100044 11 3330816 to 3330830 14 + TSS region transcription start site region 100044
Tssr100045 11 3330832 to 3330843 11 + TSS region transcription start site region 100045
Tssr100046 11 3330879 to 3330912 33 + TSS region transcription start site region 100046
Tssr100047 11 3330916 to 3330934 18 + TSS region transcription start site region 100047
Tssr100048 11 3330946 to 3330961 15 + TSS region transcription start site region 100048