Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:32670864-33181112

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fbxw11 11 32642724 to 32746816 104092 + protein coding gene F-box and WD-40 domain protein 11
Tssr100872 11 32674487 to 32674491 4 + TSS region transcription start site region 100872
Tssr100873 11 32682947 to 32682952 5 + TSS region transcription start site region 100873
Tssr100874 11 32696851 to 32696854 3 + TSS region transcription start site region 100874
5830420C07Rik 11 32696994 to 32699560 2566 unclassified gene RIKEN cDNA 5830420C07 gene
Tssr100875 11 32744919 to 32744935 16 + TSS region transcription start site region 100875
Tssr100876 11 32745462 to 32745499 37 + TSS region transcription start site region 100876
Gm8192 11 32774682 to 32775639 957 - pseudogene predicted gene 8192
Gm35723 11 32782023 to 32845320 63297 + lncRNA gene predicted gene, 35723
4930555O08Rik 11 32789762 to 32790725 963 - lincRNA gene RIKEN cDNA 4930555O08 gene
Smim23 11 32820376 to 32824594 4218 - protein coding gene small integral membrane protein 23
Tssr107316 11 32824548 to 32824551 3 - TSS region transcription start site region 107316
Tssr107317 11 32824566 to 32824586 20 - TSS region transcription start site region 107317
Cpgi2708 11 32846847 to 32847020 173 CpG island CpG island 2708
Gm12110 11 32880362 to 32880940 578 - pseudogene predicted gene 12110
Gm12112 11 32910373 to 32910603 230 + pseudogene predicted gene 12112
Gm12111 11 32911615 to 32926445 14830 - lincRNA gene predicted gene 12111
Cpgi2709 11 32925864 to 32926112 248 CpG island CpG island 2709
Gm26052 11 32984216 to 32984299 83 - miRNA gene predicted gene, 26052
Rpsa-ps4 11 33038816 to 33039703 887 - pseudogene ribosomal protein S4, pseudogene 4
Tssr107318 11 33039773 to 33039782 9 - TSS region transcription start site region 107318
Gm12114 11 33068551 to 33080521 11970 + lincRNA gene predicted gene 12114
Fgf18 11 33117430 to 33147400 29970 - protein coding gene fibroblast growth factor 18
Cpgi2710 11 33122653 to 33123394 741 CpG island CpG island 2710
Cpgi2711 11 33146647 to 33148696 2049 CpG island CpG island 2711
Tssr107319 11 33147408 to 33147448 40 - TSS region transcription start site region 107319
Tssr107320 11 33147808 to 33147828 20 - TSS region transcription start site region 107320
2610201A13Rik 11 33150498 to 33151449 951 unclassified gene RIKEN cDNA 2610201A13 gene
Tssr107321 11 33151287 to 33151291 4 - TSS region transcription start site region 107321
Npm1 11 33152498 to 33163206 10708 - protein coding gene nucleophosmin 1
Tssr107322 11 33159962 to 33159980 18 - TSS region transcription start site region 107322
Cpgi2712 11 33162313 to 33163609 1296 CpG island CpG island 2712
Tssr107323 11 33162315 to 33162353 38 - TSS region transcription start site region 107323
Tssr107324 11 33163072 to 33163087 15 - TSS region transcription start site region 107324
Tssr100877 11 33163333 to 33163343 10 + TSS region transcription start site region 100877
Gm12115 11 33172919 to 33173365 446 + pseudogene predicted gene 12115
Cpgi2713 11 33180679 to 33180993 314 CpG island CpG island 2713