Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:32599566-33049586

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stk10 11 32533305 to 32624587 91282 + protein coding gene serine/threonine kinase 10
Tssr100865 11 32611046 to 32611060 14 + TSS region transcription start site region 100865
Tssr100866 11 32611064 to 32611083 19 + TSS region transcription start site region 100866
Cpgi2706 11 32614424 to 32614935 511 CpG island CpG island 2706
Tssr107314 11 32614683 to 32614694 11 - TSS region transcription start site region 107314
Tssr107315 11 32614700 to 32614710 10 - TSS region transcription start site region 107315
Tssr100867 11 32614748 to 32614783 35 + TSS region transcription start site region 100867
Tssr100868 11 32636448 to 32636451 3 + TSS region transcription start site region 100868
Cpgi2707 11 32642119 to 32643504 1385 CpG island CpG island 2707
Tssr100869 11 32642518 to 32642537 19 + TSS region transcription start site region 100869
Tssr100870 11 32642706 to 32642821 115 + TSS region transcription start site region 100870
Fbxw11 11 32642724 to 32746816 104092 + protein coding gene F-box and WD-40 domain protein 11
Tssr100871 11 32642826 to 32642841 15 + TSS region transcription start site region 100871
Tssr100872 11 32674487 to 32674491 4 + TSS region transcription start site region 100872
Tssr100873 11 32682947 to 32682952 5 + TSS region transcription start site region 100873
Tssr100874 11 32696851 to 32696854 3 + TSS region transcription start site region 100874
5830420C07Rik 11 32696994 to 32699560 2566 unclassified gene RIKEN cDNA 5830420C07 gene
Tssr100875 11 32744919 to 32744935 16 + TSS region transcription start site region 100875
Tssr100876 11 32745462 to 32745499 37 + TSS region transcription start site region 100876
Gm8192 11 32774682 to 32775639 957 - pseudogene predicted gene 8192
Gm35723 11 32782023 to 32845320 63297 + lncRNA gene predicted gene, 35723
4930555O08Rik 11 32789762 to 32790725 963 - lincRNA gene RIKEN cDNA 4930555O08 gene
Smim23 11 32820376 to 32824594 4218 - protein coding gene small integral membrane protein 23
Tssr107316 11 32824548 to 32824551 3 - TSS region transcription start site region 107316
Tssr107317 11 32824566 to 32824586 20 - TSS region transcription start site region 107317
Cpgi2708 11 32846847 to 32847020 173 CpG island CpG island 2708
Gm12110 11 32880362 to 32880940 578 - pseudogene predicted gene 12110
Gm12112 11 32910373 to 32910603 230 + pseudogene predicted gene 12112
Gm12111 11 32911615 to 32926445 14830 - lincRNA gene predicted gene 12111
Cpgi2709 11 32925864 to 32926112 248 CpG island CpG island 2709
Gm26052 11 32984216 to 32984299 83 - miRNA gene predicted gene, 26052
Rpsa-ps4 11 33038816 to 33039703 887 - pseudogene ribosomal protein S4, pseudogene 4
Tssr107318 11 33039773 to 33039782 9 - TSS region transcription start site region 107318