Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:32222705-32312748

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2697 11 32221260 to 32222949 1689 CpG island CpG island 2697
Cpgi2698 11 32226238 to 32226954 716 CpG island CpG island 2698
Tssr100832 11 32226481 to 32226545 64 + TSS region transcription start site region 100832
Mpg 11 32226505 to 32232700 6195 + protein coding gene N-methylpurine-DNA glycosylase
Nprl3 11 32231963 to 32267707 35744 - protein coding gene nitrogen permease regulator-like 3
Tssr3459 11 32237238 to 32237239 1 - TSS region transcription start site region 3459
Tssr107303 11 32265424 to 32265428 4 - TSS region transcription start site region 107303
Cpgi2699 11 32267209 to 32268170 961 CpG island CpG island 2699
Tssr107304 11 32267583 to 32267677 94 - TSS region transcription start site region 107304
Tssr100833 11 32267705 to 32267748 43 + TSS region transcription start site region 100833
Tssr100834 11 32276593 to 32276609 16 + TSS region transcription start site region 100834
Hba-x 11 32276600 to 32278116 1516 + protein coding gene hemoglobin X, alpha-like embryonic chain in Hba complex
D11Mit53 11 32277092 to 32277321 229 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 53
Tssr100835 11 32277293 to 32277304 11 + TSS region transcription start site region 100835
Tssr100836 11 32277564 to 32277584 20 + TSS region transcription start site region 100836
Tssr100837 11 32277586 to 32277613 27 + TSS region transcription start site region 100837
Cpgi2700 11 32277693 to 32278053 360 CpG island CpG island 2700
Tssr107305 11 32277763 to 32277774 11 - TSS region transcription start site region 107305
Tssr100838 11 32277907 to 32277928 21 + TSS region transcription start site region 100838
Tssr107306 11 32278001 to 32278041 40 - TSS region transcription start site region 107306
Hba-a1 11 32283672 to 32284486 814 + protein coding gene hemoglobin alpha, adult chain 1
Tssr100839 11 32284304 to 32284343 39 + TSS region transcription start site region 100839
Cpgi2701 11 32286842 to 32287128 286 CpG island CpG island 2701
Tssr100840 11 32286946 to 32286980 34 + TSS region transcription start site region 100840
Hbq1b 11 32286965 to 32287784 819 + protein coding gene hemoglobin, theta 1B
Tssr100841 11 32286991 to 32287007 16 + TSS region transcription start site region 100841
Hba-a2 11 32296489 to 32297298 809 + protein coding gene hemoglobin alpha, adult chain 2
Tssr100842 11 32296491 to 32296492 1 + TSS region transcription start site region 100842
Tssr100843 11 32297127 to 32297159 32 + TSS region transcription start site region 100843
Tssr100844 11 32297532 to 32297564 32 + TSS region transcription start site region 100844
Hbq1a 11 32300069 to 32300873 804 + protein coding gene hemoglobin, theta 1A
Gm46275 11 32304949 to 32312233 7284 + lncRNA gene predicted gene, 46275