Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:32130687-32280692

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39676 11 32125827 to 32136643 10816 - lncRNA gene predicted gene, 39676
Tssr107294 11 32136107 to 32136145 38 - TSS region transcription start site region 107294
Gm40823 11 32161174 to 32173939 12765 + lncRNA gene predicted gene, 40823
Cpgi2694 11 32162170 to 32162508 338 CpG island CpG island 2694
Gm12109 11 32185005 to 32185701 696 + pseudogene predicted gene 12109
Il9r 11 32187541 to 32200279 12738 - protein coding gene interleukin 9 receptor
Tssr107295 11 32199260 to 32199297 37 - TSS region transcription start site region 107295
Tssr107296 11 32199337 to 32199352 15 - TSS region transcription start site region 107296
Tssr107297 11 32199369 to 32199380 11 - TSS region transcription start site region 107297
Tssr107298 11 32200248 to 32200271 23 - TSS region transcription start site region 107298
Tssr107299 11 32200273 to 32200286 13 - TSS region transcription start site region 107299
Tssr107300 11 32200466 to 32200472 6 - TSS region transcription start site region 107300
Cpgi2695 11 32205021 to 32205856 835 CpG island CpG island 2695
Tssr100829 11 32205411 to 32205481 70 + TSS region transcription start site region 100829
Snrnp25 11 32205415 to 32208984 3569 + protein coding gene small nuclear ribonucleoprotein 25 (U11/U12)
Tssr100830 11 32205483 to 32205504 21 + TSS region transcription start site region 100830
Tssr107301 11 32205687 to 32205692 5 - TSS region transcription start site region 107301
Rhbdf1 11 32209585 to 32222300 12715 - protein coding gene rhomboid 5 homolog 1
Cpgi2696 11 32213147 to 32213525 378 CpG island CpG island 2696
Cpgi2697 11 32221260 to 32222949 1689 CpG island CpG island 2697
Tssr100831 11 32221417 to 32221435 18 + TSS region transcription start site region 100831
Tssr107302 11 32222233 to 32222315 82 - TSS region transcription start site region 107302
Cpgi2698 11 32226238 to 32226954 716 CpG island CpG island 2698
Tssr100832 11 32226481 to 32226545 64 + TSS region transcription start site region 100832
Mpg 11 32226505 to 32232700 6195 + protein coding gene N-methylpurine-DNA glycosylase
Nprl3 11 32231963 to 32267707 35744 - protein coding gene nitrogen permease regulator-like 3
Tssr3459 11 32237238 to 32237239 1 - TSS region transcription start site region 3459
Tssr107303 11 32265424 to 32265428 4 - TSS region transcription start site region 107303
Cpgi2699 11 32267209 to 32268170 961 CpG island CpG island 2699
Tssr107304 11 32267583 to 32267677 94 - TSS region transcription start site region 107304
Tssr100833 11 32267705 to 32267748 43 + TSS region transcription start site region 100833
Tssr100834 11 32276593 to 32276609 16 + TSS region transcription start site region 100834
Hba-x 11 32276600 to 32278116 1516 + protein coding gene hemoglobin X, alpha-like embryonic chain in Hba complex
D11Mit53 11 32277092 to 32277321 229 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 53
Tssr100835 11 32277293 to 32277304 11 + TSS region transcription start site region 100835
Tssr100836 11 32277564 to 32277584 20 + TSS region transcription start site region 100836
Tssr100837 11 32277586 to 32277613 27 + TSS region transcription start site region 100837
Cpgi2700 11 32277693 to 32278053 360 CpG island CpG island 2700
Tssr107305 11 32277763 to 32277774 11 - TSS region transcription start site region 107305
Tssr100838 11 32277907 to 32277928 21 + TSS region transcription start site region 100838
Tssr107306 11 32278001 to 32278041 40 - TSS region transcription start site region 107306