Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3178984-3288988

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sfi1 11 3131850 to 3193463 61613 - protein coding gene Sfi1 homolog, spindle assembly associated (yeast)
Cpgi2464 11 3183767 to 3184055 288 CpG island CpG island 2464
Cpgi2468 11 3188729 to 3189425 696 CpG island CpG island 2468
Cpgi2469 11 3192018 to 3194670 2652 CpG island CpG island 2469
9530037G02Rik 11 3193080 to 3194309 1229 unclassified gene RIKEN cDNA 9530037G02 gene
Tssr106450 11 3193127 to 3193173 46 - TSS region transcription start site region 106450
Tssr106451 11 3193388 to 3193450 62 - TSS region transcription start site region 106451
Tssr100011 11 3193490 to 3193510 20 + TSS region transcription start site region 100011
Gm12735 11 3193516 to 3194263 747 - antisense lncRNA gene predicted gene 12735
Tssr100012 11 3193562 to 3193578 16 + TSS region transcription start site region 100012
Fau-ps2 11 3196390 to 3196727 337 - pseudogene Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived), pseudogene 2
Tssr106452 11 3198517 to 3198561 44 - TSS region transcription start site region 106452
Tssr100013 11 3198582 to 3198608 26 + TSS region transcription start site region 100013
Cpgi2474 11 3202112 to 3203348 1236 CpG island CpG island 2474
Eif4enif1 11 3202392 to 3244588 42196 + protein coding gene eukaryotic translation initiation factor 4E nuclear import factor 1
Tssr100014 11 3202612 to 3202654 42 + TSS region transcription start site region 100014
Tssr100015 11 3202684 to 3202729 45 + TSS region transcription start site region 100015
Tssr100016 11 3202876 to 3202904 28 + TSS region transcription start site region 100016
Tssr100017 11 3202908 to 3202933 25 + TSS region transcription start site region 100017
Tssr106453 11 3203333 to 3203360 27 - TSS region transcription start site region 106453
Tssr100018 11 3223379 to 3223382 3 + TSS region transcription start site region 100018
Tssr100019 11 3233984 to 3233988 4 + TSS region transcription start site region 100019
Drg1 11 3249919 to 3266652 16733 - protein coding gene developmentally regulated GTP binding protein 1
Cpgi2475 11 3265825 to 3266952 1127 CpG island CpG island 2475
Tssr106454 11 3266322 to 3266333 11 - TSS region transcription start site region 106454
Tssr106455 11 3266342 to 3266353 11 - TSS region transcription start site region 106455
Tssr106456 11 3266377 to 3266423 46 - TSS region transcription start site region 106456
Tssr100020 11 3266506 to 3266534 28 + TSS region transcription start site region 100020
Cpgi2476 11 3288482 to 3291899 3417 CpG island CpG island 2476