Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:31491359-31852181

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr100768 11 31545800 to 31545806 6 + TSS region transcription start site region 100768
Tssr100769 11 31545870 to 31545891 21 + TSS region transcription start site region 100769
Tssr100770 11 31545893 to 31545898 5 + TSS region transcription start site region 100770
D11Mit134 11 31580603 to 31580711 108 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 134
Gm35063 11 31617804 to 31619397 1593 + lncRNA gene predicted gene, 35063
Bod1 11 31665181 to 31671885 6704 - protein coding gene biorientation of chromosomes in cell division 1
Cpgi2690 11 31671359 to 31672181 822 CpG island CpG island 2690
Tssr107284 11 31671804 to 31671856 52 - TSS region transcription start site region 107284
Tssr107285 11 31671863 to 31671881 18 - TSS region transcription start site region 107285
Tssr100771 11 31672022 to 31672050 28 + TSS region transcription start site region 100771
Gm38061 11 31698648 to 31699012 364 + unclassified gene predicted gene, 38061
Gm39673 11 31704596 to 31716933 12337 - lncRNA gene predicted gene, 39673
Gm35131 11 31723591 to 31726994 3403 - lncRNA gene predicted gene, 35131
Tssr100772 11 31733319 to 31733326 7 + TSS region transcription start site region 100772
Tssr100773 11 31733984 to 31733988 4 + TSS region transcription start site region 100773
Gm39674 11 31748290 to 31751296 3006 - lncRNA gene predicted gene, 39674
Tssr107286 11 31779459 to 31779503 44 - TSS region transcription start site region 107286
Tssr107287 11 31779628 to 31779632 4 - TSS region transcription start site region 107287
Tssr100774 11 31796433 to 31796461 28 + TSS region transcription start site region 100774
Tssr100775 11 31796508 to 31796517 9 + TSS region transcription start site region 100775
D630024D03Rik 11 31800688 to 31824547 23859 - lincRNA gene RIKEN cDNA D630024D03 gene
Tssr107288 11 31821283 to 31821311 28 - TSS region transcription start site region 107288
Tssr100776 11 31822735 to 31822740 5 + TSS region transcription start site region 100776
Tssr107289 11 31824431 to 31824442 11 - TSS region transcription start site region 107289
Tssr107290 11 31824463 to 31824480 17 - TSS region transcription start site region 107290
Tssr107291 11 31824518 to 31824535 17 - TSS region transcription start site region 107291
Tssr107292 11 31824541 to 31824552 11 - TSS region transcription start site region 107292
Gm39675 11 31830465 to 31837934 7469 - lncRNA gene predicted gene, 39675
Tssr100777 11 31831792 to 31831798 6 + TSS region transcription start site region 100777
Tssr100778 11 31832115 to 31832136 21 + TSS region transcription start site region 100778
Gm12107 11 31832660 to 31838214 5554 + lincRNA gene predicted gene 12107
Tssr100779 11 31832708 to 31832716 8 + TSS region transcription start site region 100779
Tssr100780 11 31851371 to 31851379 8 + TSS region transcription start site region 100780