Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:31466863-31876881

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr100768 11 31545800 to 31545806 6 + TSS region transcription start site region 100768
Tssr100769 11 31545870 to 31545891 21 + TSS region transcription start site region 100769
Tssr100770 11 31545893 to 31545898 5 + TSS region transcription start site region 100770
D11Mit134 11 31580603 to 31580711 108 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 134
Gm35063 11 31617804 to 31619397 1593 + lncRNA gene predicted gene, 35063
Bod1 11 31665181 to 31671885 6704 - protein coding gene biorientation of chromosomes in cell division 1
Cpgi2690 11 31671359 to 31672181 822 CpG island CpG island 2690
Tssr107284 11 31671804 to 31671856 52 - TSS region transcription start site region 107284
Tssr107285 11 31671863 to 31671881 18 - TSS region transcription start site region 107285
Tssr100771 11 31672022 to 31672050 28 + TSS region transcription start site region 100771
Gm38061 11 31698648 to 31699012 364 + unclassified gene predicted gene, 38061
Gm39673 11 31704596 to 31716933 12337 - lncRNA gene predicted gene, 39673
Gm35131 11 31723591 to 31726994 3403 - lncRNA gene predicted gene, 35131
Tssr100772 11 31733319 to 31733326 7 + TSS region transcription start site region 100772
Tssr100773 11 31733984 to 31733988 4 + TSS region transcription start site region 100773
Gm39674 11 31748290 to 31751296 3006 - lncRNA gene predicted gene, 39674
Tssr107286 11 31779459 to 31779503 44 - TSS region transcription start site region 107286
Tssr107287 11 31779628 to 31779632 4 - TSS region transcription start site region 107287
Tssr100774 11 31796433 to 31796461 28 + TSS region transcription start site region 100774
Tssr100775 11 31796508 to 31796517 9 + TSS region transcription start site region 100775
D630024D03Rik 11 31800688 to 31824547 23859 - lincRNA gene RIKEN cDNA D630024D03 gene
Tssr107288 11 31821283 to 31821311 28 - TSS region transcription start site region 107288
Tssr100776 11 31822735 to 31822740 5 + TSS region transcription start site region 100776
Tssr107289 11 31824431 to 31824442 11 - TSS region transcription start site region 107289
Tssr107290 11 31824463 to 31824480 17 - TSS region transcription start site region 107290
Tssr107291 11 31824518 to 31824535 17 - TSS region transcription start site region 107291
Tssr107292 11 31824541 to 31824552 11 - TSS region transcription start site region 107292
Gm39675 11 31830465 to 31837934 7469 - lncRNA gene predicted gene, 39675
Tssr100777 11 31831792 to 31831798 6 + TSS region transcription start site region 100777
Tssr100778 11 31832115 to 31832136 21 + TSS region transcription start site region 100778
Gm12107 11 31832660 to 31838214 5554 + lincRNA gene predicted gene 12107
Tssr100779 11 31832708 to 31832716 8 + TSS region transcription start site region 100779
Tssr100780 11 31851371 to 31851379 8 + TSS region transcription start site region 100780
1700012M20Rik 11 31870096 to 31870744 648 unclassified gene RIKEN cDNA 1700012M20 gene
Cpgi2691 11 31870253 to 31871457 1204 CpG island CpG island 2691
Tssr100781 11 31870868 to 31870900 32 + TSS region transcription start site region 100781
Tssr100782 11 31870901 to 31870923 22 + TSS region transcription start site region 100782
Tssr100783 11 31871373 to 31871399 26 + TSS region transcription start site region 100783
Tssr100784 11 31871411 to 31871420 9 + TSS region transcription start site region 100784
Tssr100785 11 31871502 to 31871513 11 + TSS region transcription start site region 100785
Tssr100786 11 31871522 to 31871533 11 + TSS region transcription start site region 100786
Tssr100787 11 31871560 to 31871598 38 + TSS region transcription start site region 100787
Tssr107293 11 31871612 to 31871640 28 - TSS region transcription start site region 107293
Tssr100788 11 31871665 to 31871675 10 + TSS region transcription start site region 100788
Tssr100789 11 31871684 to 31871710 26 + TSS region transcription start site region 100789
Tssr100790 11 31871810 to 31871822 12 + TSS region transcription start site region 100790
Tssr100791 11 31872100 to 31872104 4 + TSS region transcription start site region 100791
Cpeb4 11 31872211 to 31935634 63423 + protein coding gene cytoplasmic polyadenylation element binding protein 4
Tssr100792 11 31872225 to 31872264 39 + TSS region transcription start site region 100792
Tssr100793 11 31872707 to 31872723 16 + TSS region transcription start site region 100793
Tssr100794 11 31872786 to 31872797 11 + TSS region transcription start site region 100794
Tssr100795 11 31872934 to 31872987 53 + TSS region transcription start site region 100795
Tssr100796 11 31873089 to 31873127 38 + TSS region transcription start site region 100796
Tssr100797 11 31874319 to 31874345 26 + TSS region transcription start site region 100797