Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:3112121-3164791

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi2431 11 3123264 to 3124136 872 CpG island CpG island 2431
Tssr106442 11 3123905 to 3123920 15 - TSS region transcription start site region 106442
Tssr100004 11 3123999 to 3124031 32 + TSS region transcription start site region 100004
Tssr100005 11 3124043 to 3124054 11 + TSS region transcription start site region 100005
Pisd-ps1 11 3125904 to 3131004 5100 + pseudogene phosphatidylserine decarboxylase, pseudogene 1
Cpgi2432 11 3127139 to 3127599 460 CpG island CpG island 2432
Cpgi2433 11 3128865 to 3129174 309 CpG island CpG island 2433
Cpgi2434 11 3129531 to 3130076 545 CpG island CpG island 2434
Cpgi2435 11 3130745 to 3131132 387 CpG island CpG island 2435
Tssr100006 11 3131098 to 3131110 12 + TSS region transcription start site region 100006
Sfi1 11 3131850 to 3193463 61613 - protein coding gene Sfi1 homolog, spindle assembly associated (yeast)
Cpgi2436 11 3131947 to 3137915 5968 CpG island CpG island 2436
Gm33862 11 3137121 to 3139791 2670 + lncRNA gene predicted gene, 33862
Cpgi2438 11 3139221 to 3140243 1022 CpG island CpG island 2438
Gm11399 11 3142048 to 3143363 1315 + antisense lncRNA gene predicted gene 11399
Cpgi2440 11 3142049 to 3146471 4422 CpG island CpG island 2440
Tssr106443 11 3146351 to 3146392 41 - TSS region transcription start site region 106443
Tssr100007 11 3147562 to 3147573 11 + TSS region transcription start site region 100007
Tssr100008 11 3148817 to 3148819 2 + TSS region transcription start site region 100008
Tssr106444 11 3148908 to 3148916 8 - TSS region transcription start site region 106444
Cpgi2444 11 3149592 to 3151583 1991 CpG island CpG island 2444
Gm11400 11 3149742 to 3150955 1213 - pseudogene predicted gene 11400
Tssr106445 11 3150339 to 3150369 30 - TSS region transcription start site region 106445
Tssr106446 11 3151426 to 3151459 33 - TSS region transcription start site region 106446
Cpgi2445 11 3152102 to 3153870 1768 CpG island CpG island 2445
Tssr106447 11 3156341 to 3156344 3 - TSS region transcription start site region 106447
Cpgi2448 11 3156421 to 3158980 2559 CpG island CpG island 2448
Tssr100009 11 3163911 to 3163929 18 + TSS region transcription start site region 100009
Tssr100010 11 3163954 to 3164001 47 + TSS region transcription start site region 100010