Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:30982376-31382462

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Asb3 11 30954222 to 31102704 148482 + protein coding gene ankyrin repeat and SOCS box-containing 3
Chac2 11 30976707 to 30986350 9643 - protein coding gene ChaC, cation transport regulator 2
Tssr100767 11 30985455 to 30985459 4 + TSS region transcription start site region 100767
Cpgi2687 11 30986103 to 30986348 245 CpG island CpG island 2687
Tssr107273 11 30986246 to 30986257 11 - TSS region transcription start site region 107273
Tssr107274 11 30986264 to 30986296 32 - TSS region transcription start site region 107274
Tssr107275 11 30986297 to 30986325 28 - TSS region transcription start site region 107275
Tssr107276 11 30986326 to 30986372 46 - TSS region transcription start site region 107276
Gm12102 11 31003328 to 31003898 570 - pseudogene predicted gene 12102
A230054M22Rik 11 31103233 to 31105354 2121 unclassified gene RIKEN cDNA A230054M22 gene
Gm12105 11 31120003 to 31120781 778 + pseudogene predicted gene 12105
Gm40822 11 31161932 to 31169846 7914 - lncRNA gene predicted gene, 40822
Gm12106 11 31177818 to 31184374 6556 - pseudogene predicted gene 12106
Gm17332 11 31182376 to 31182462 86 - protein coding gene predicted gene, 17332
Tssr107277 11 31359334 to 31359338 4 - TSS region transcription start site region 107277
Stc2 11 31359441 to 31370061 10620 - protein coding gene stanniocalcin 2
Cpgi2688 11 31368440 to 31370566 2126 CpG island CpG island 2688
Tssr107278 11 31369862 to 31369882 20 - TSS region transcription start site region 107278
Tssr107279 11 31369883 to 31369911 28 - TSS region transcription start site region 107279
Tssr107280 11 31370066 to 31370080 14 - TSS region transcription start site region 107280
Tssr107281 11 31370098 to 31370110 12 - TSS region transcription start site region 107281
Tssr107282 11 31370119 to 31370128 9 - TSS region transcription start site region 107282
Cpgi2689 11 31371269 to 31371869 600 CpG island CpG island 2689