Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:30825003-31415781

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Psme4 11 30771728 to 30880361 108633 + protein coding gene proteasome (prosome, macropain) activator subunit 4
Tssr100759 11 30831289 to 30831298 9 + TSS region transcription start site region 100759
Tssr100760 11 30855755 to 30855762 7 + TSS region transcription start site region 100760
Tssr100761 11 30863667 to 30863671 4 + TSS region transcription start site region 100761
Tssr100762 11 30883730 to 30883737 7 + TSS region transcription start site region 100762
Cpgi2685 11 30885161 to 30885928 767 CpG island CpG island 2685
Gpr75 11 30885358 to 30893729 8371 + protein coding gene G protein-coupled receptor 75
Tssr100763 11 30885400 to 30885430 30 + TSS region transcription start site region 100763
Gm12104 11 30906952 to 30907920 968 - pseudogene predicted gene 12104
D11Mit215 11 30909133 to 30909266 133 DNA segment DNA segment, Chr 11, Massachusetts Institute of Technology 215
Erlec1 11 30930774 to 30954335 23561 - protein coding gene endoplasmic reticulum lectin 1
Cpgi2686 11 30953789 to 30954742 953 CpG island CpG island 2686
Tssr107271 11 30954080 to 30954143 63 - TSS region transcription start site region 107271
Asb3 11 30954222 to 31102704 148482 + protein coding gene ankyrin repeat and SOCS box-containing 3
Tssr107272 11 30954325 to 30954393 68 - TSS region transcription start site region 107272
Tssr100764 11 30954389 to 30954439 50 + TSS region transcription start site region 100764
Tssr100765 11 30954450 to 30954480 30 + TSS region transcription start site region 100765
Tssr100766 11 30959007 to 30959018 11 + TSS region transcription start site region 100766
Chac2 11 30976707 to 30986350 9643 - protein coding gene ChaC, cation transport regulator 2
Tssr100767 11 30985455 to 30985459 4 + TSS region transcription start site region 100767
Cpgi2687 11 30986103 to 30986348 245 CpG island CpG island 2687
Tssr107273 11 30986246 to 30986257 11 - TSS region transcription start site region 107273
Tssr107274 11 30986264 to 30986296 32 - TSS region transcription start site region 107274
Tssr107275 11 30986297 to 30986325 28 - TSS region transcription start site region 107275
Tssr107276 11 30986326 to 30986372 46 - TSS region transcription start site region 107276
Gm12102 11 31003328 to 31003898 570 - pseudogene predicted gene 12102
A230054M22Rik 11 31103233 to 31105354 2121 unclassified gene RIKEN cDNA A230054M22 gene
Gm12105 11 31120003 to 31120781 778 + pseudogene predicted gene 12105
Gm40822 11 31161932 to 31169846 7914 - lncRNA gene predicted gene, 40822
Gm12106 11 31177818 to 31184374 6556 - pseudogene predicted gene 12106
Gm17332 11 31182376 to 31182462 86 - protein coding gene predicted gene, 17332
Tssr107277 11 31359334 to 31359338 4 - TSS region transcription start site region 107277
Stc2 11 31359441 to 31370061 10620 - protein coding gene stanniocalcin 2
Cpgi2688 11 31368440 to 31370566 2126 CpG island CpG island 2688
Tssr107278 11 31369862 to 31369882 20 - TSS region transcription start site region 107278
Tssr107279 11 31369883 to 31369911 28 - TSS region transcription start site region 107279
Tssr107280 11 31370066 to 31370080 14 - TSS region transcription start site region 107280
Tssr107281 11 31370098 to 31370110 12 - TSS region transcription start site region 107281
Tssr107282 11 31370119 to 31370128 9 - TSS region transcription start site region 107282
Cpgi2689 11 31371269 to 31371869 600 CpG island CpG island 2689
Tssr107283 11 31407868 to 31407869 1 - TSS region transcription start site region 107283
Gm35012 11 31410170 to 31419054 8884 + lncRNA gene predicted gene, 35012