Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 11:30469013-30829642

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930505A04Rik 11 30426006 to 30471827 45821 - protein coding gene RIKEN cDNA 4930505A04 gene
Tssr107257 11 30471792 to 30471820 28 - TSS region transcription start site region 107257
Tssr107258 11 30471855 to 30471860 5 - TSS region transcription start site region 107258
Tssr107259 11 30471874 to 30471886 12 - TSS region transcription start site region 107259
Acyp2 11 30505991 to 30649587 143596 - protein coding gene acylphosphatase 2, muscle type
Gm12096 11 30528295 to 30529398 1103 + pseudogene predicted gene 12096
Gm12098 11 30568182 to 30568898 716 - pseudogene predicted gene 12098
Gm12097 11 30572791 to 30574454 1663 - pseudogene predicted gene 12097
Tssr107260 11 30573115 to 30573144 29 - TSS region transcription start site region 107260
Tssr107261 11 30576918 to 30576922 4 - TSS region transcription start site region 107261
Cpgi2682 11 30649013 to 30649642 629 CpG island CpG island 2682
Tssr107262 11 30649364 to 30649374 10 - TSS region transcription start site region 107262
Tssr107263 11 30649375 to 30649413 38 - TSS region transcription start site region 107263
Tssr107264 11 30649417 to 30649445 28 - TSS region transcription start site region 107264
Tssr107265 11 30649453 to 30649470 17 - TSS region transcription start site region 107265
Tssr107266 11 30649485 to 30649498 13 - TSS region transcription start site region 107266
Tssr107267 11 30649510 to 30649523 13 - TSS region transcription start site region 107267
Tssr3456 11 30657364 to 30657365 1 + TSS region transcription start site region 3456
Gm12099 11 30705155 to 30705901 746 - pseudogene predicted gene 12099
Tssr107268 11 30749070 to 30749118 48 - TSS region transcription start site region 107268
Gm12100 11 30750832 to 30756147 5315 + unclassified non-coding RNA gene predicted gene 12100
Gm12101 11 30754572 to 30754961 389 - pseudogene predicted gene 12101
Cpgi2683 11 30754829 to 30755552 723 CpG island CpG island 2683
4930448L02Rik 11 30771292 to 30771673 381 unclassified gene RIKEN cDNA 4930448L02 gene
Cpgi2684 11 30771441 to 30772703 1262 CpG island CpG island 2684
Tssr107269 11 30771660 to 30771679 19 - TSS region transcription start site region 107269
Psme4 11 30771728 to 30880361 108633 + protein coding gene proteasome (prosome, macropain) activator subunit 4
Tssr100752 11 30771745 to 30771792 47 + TSS region transcription start site region 100752
Tssr100753 11 30771795 to 30771812 17 + TSS region transcription start site region 100753
Tssr100754 11 30771815 to 30771818 3 + TSS region transcription start site region 100754
Tssr100755 11 30771833 to 30771842 9 + TSS region transcription start site region 100755
Tssr100756 11 30771843 to 30771854 11 + TSS region transcription start site region 100756
Tssr107270 11 30785663 to 30785667 4 - TSS region transcription start site region 107270
Tssr100757 11 30786716 to 30786720 4 + TSS region transcription start site region 100757
Tssr100758 11 30812478 to 30812493 15 + TSS region transcription start site region 100758
Gm12103 11 30822309 to 30822670 361 - pseudogene predicted gene 12103