MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 11:30403295-30654398

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34695	11	30422226 to 30427093	4867	+	lncRNA gene	predicted gene, 34695
4930505A04Rik	11	30426006 to 30471827	45821	-	protein coding gene	RIKEN cDNA 4930505A04 gene
Tssr107257	11	30471792 to 30471820	28	-	TSS region	transcription start site region 107257
Tssr107258	11	30471855 to 30471860	5	-	TSS region	transcription start site region 107258
Tssr107259	11	30471874 to 30471886	12	-	TSS region	transcription start site region 107259
Acyp2	11	30505991 to 30649587	143596	-	protein coding gene	acylphosphatase 2, muscle type
Gm12096	11	30528295 to 30529398	1103	+	pseudogene	predicted gene 12096
Gm12098	11	30568182 to 30568898	716	-	pseudogene	predicted gene 12098
Gm12097	11	30572791 to 30574454	1663	-	pseudogene	predicted gene 12097
Tssr107260	11	30573115 to 30573144	29	-	TSS region	transcription start site region 107260
Tssr107261	11	30576918 to 30576922	4	-	TSS region	transcription start site region 107261
Cpgi2682	11	30649013 to 30649642	629		CpG island	CpG island 2682
Tssr107262	11	30649364 to 30649374	10	-	TSS region	transcription start site region 107262
Tssr107263	11	30649375 to 30649413	38	-	TSS region	transcription start site region 107263
Tssr107264	11	30649417 to 30649445	28	-	TSS region	transcription start site region 107264
Tssr107265	11	30649453 to 30649470	17	-	TSS region	transcription start site region 107265
Tssr107266	11	30649485 to 30649498	13	-	TSS region	transcription start site region 107266
Tssr107267	11	30649510 to 30649523	13	-	TSS region	transcription start site region 107267